Gene Mrad2831_2383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_2383 
Symbol 
ID6138416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp2525551 
End bp2527080 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content73% 
IMG OID641628093 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_001755061 
Protein GI170748801 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000824342 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00328084 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCTCTT CTCTCTACCG ACGCCTCACC GTCGGGCTTG CGGCGCTGAC GGGTCTGCTC 
GGGGCGGGCC TGGTCGGGAT CGGCGCAGCG AACGCCGTGA CCGTGCCGAT CCTCGTGGCC
GACGTGGATT CCGGCAAGGT CATCTACGCG CAGGCGCCGA CCGATCCCTG GTACCCGGCC
TCGATCACGA AGCTGATGAC GACCTACGTC GCCCTGGACC TCGTCCGGCA GGGCAAGGTC
TCGCTCGATT CGATGATCAC CATCTCGGCC GCCGCCGCCG CCGAGCCGCC CTCGAAGATG
GGCTTCAAGC CGGGGACGCA GCTCACCCTC GACAACGCCC TGAAGATCAT CATGGTCAAG
TCGGCGAACG ACGTCGCCTA CGCGATCGGC GAGTCGCTCG GGGGATCCGT CGAGAACTTC
GCCGCCCTGA TGAACGAGAC CGCGCAGCGG ATCGGCATGC ACGACAGCCG CTGGTACAAT
CCCAACGGCC TGCCCGACCC GCGCCAGTGG ACCTCGGCCC GCGACATGGC GGTCCTCGCC
CGGGCGCTGA TCCGCGACTT CCCGGATTCC CACGACCTGT TCTCGATCTC GGCGATCCAG
TTCGGCCGCG CCGTCATGGC GAACCACAAC GGCCTGCTCG GGCGCTATCC CGGCACGGAC
GGGATGAAGA CGGGCTTCAT CTGCTCGGGC GGCTTCAACG TCGTGGCGAC CGCCACGCGC
AACGGCCGGC GGATCGTCAC CATCGTGATG GGGCAGCCGA GCCCGCGCGA GCGCGACGTG
AAGACCGCCG ACCTGTTCGA CTACGCCTTC GGCCAGAGCG CCGGCTGGTC GAGCCCCACC
CTCGACGCGC TCCCGGCCTC CGCGATCCCG GCGCCCCCGG ACATGCGTCC CTTCGTGTGC
GGCGGCAAGA AGCCCCCGGC CATCGAGGAC GGTCCCGGCG CGCTGAGCGC CCCCGGCTCG
GCCGCGCAGC TGATCGGCGG CTCGGCGGCG AACTCGCCGG CCCTGGCGCT CGCCGCGTTC
TCCAACCCGG CCCTGCGGGC GCGGTCCCTG CCGCCGCGGG CGCCGCTCCA GCCGATCGCC
GTGTGGGTCG GCCGCAACCC GGCCGAGGGC CAGCAGATCC TCGAGGCGCA GGAGGCCGAG
CAGAAGGCCG CCGCCGCCAA CACCCGCGCC GCCAAGCTCG AGGCCGCCAA GGCCAAGCGC
GCGGCGGCCC TGGAGGCGGC CAAGCAGGCG CGCGCGGCGC GCCTGGAGCG GGCCGAGGCC
GCGAAGGCCG CCGCCAAGAC CGCCTCGAAG GTCGCCGCGA AGCCGGCCCA CGGCGTGCCC
CGGAACGCCA GCGCCTACAC GTCGGACGTC ACGCCCGGGA TGCCGGAGGC GAAGCCCGGG
AAGGGCCTGA CCAAGCCGGC GCCGAAGGCG GCCGCCCACA AGCCGGCGCC CGCCAAGGCC
GAGACGAAGC CCGAGACGAA GTCCGACAAG GCGGCCGCGA AGGCTCCGGC CAGGAAGCCG
GCCGCCAAGA AGGCGGCGGC CGACGAGTAG
 
Protein sequence
MSSSLYRRLT VGLAALTGLL GAGLVGIGAA NAVTVPILVA DVDSGKVIYA QAPTDPWYPA 
SITKLMTTYV ALDLVRQGKV SLDSMITISA AAAAEPPSKM GFKPGTQLTL DNALKIIMVK
SANDVAYAIG ESLGGSVENF AALMNETAQR IGMHDSRWYN PNGLPDPRQW TSARDMAVLA
RALIRDFPDS HDLFSISAIQ FGRAVMANHN GLLGRYPGTD GMKTGFICSG GFNVVATATR
NGRRIVTIVM GQPSPRERDV KTADLFDYAF GQSAGWSSPT LDALPASAIP APPDMRPFVC
GGKKPPAIED GPGALSAPGS AAQLIGGSAA NSPALALAAF SNPALRARSL PPRAPLQPIA
VWVGRNPAEG QQILEAQEAE QKAAAANTRA AKLEAAKAKR AAALEAAKQA RAARLERAEA
AKAAAKTASK VAAKPAHGVP RNASAYTSDV TPGMPEAKPG KGLTKPAPKA AAHKPAPAKA
ETKPETKSDK AAAKAPARKP AAKKAAADE