| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_2349 |
|---|
| Symbol | lpxC |
|---|
| ID | 6138381 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 2483592 |
|---|
| End bp | 2484539 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641628059 |
|---|
| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
|---|
| Protein accession | YP_001755027 |
|---|
| Protein GI | 170748767 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
|---|
| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAACGC ATAAACAGAC GACCCTCAAA GGGCCGGCGA CTCTCTCGGG GATCGGAGTT
CACTCCGGCA ACCCCGCCGA GATCACCATC CGACCCGCTC CGGCCAATCA CGGCATCGCC
TTCCTCCGCA CCGGTACCAC CCACGGCAAC GATCGCCTGA TCAAGGCGCA TCACGCCCTC
GTCTCCGCCA CCGAACTCTG CACTGTCCTG GGCGACGTCG AGACCGGCGC CGTCGCCACC
GTCGAGCACC TGATGTCCGC CCTCTACGGC CTGGGCGTCG ACAATGCTCT GATCGAGATC
GACGGCCCCG AGATGCCGAT CCTCGACGGA TCCGCGCTCC CCTTCGTCCA GGCGATCGAC
CAGATCGGGA TCGCCACCTG CGACACGCCG CGCCGCTGGC TCAAGATCCT CCGACACGTC
CGCATCGAGG CCGGGACATC CTTCGCGGAG CTGCGCCCGA TCGATCGCGG TTTCCGCCTC
GACGTCGAGA TCGATTTCGA GAGCCCGGTG ATCGGCCGCT CCCGCAAGGC GATGGACCTG
TCGCCCGCCA CCTACCGCCG CGAGATCGCC GGCGCCCGCA CCTTCGGGAT GATGCGGGAC
GTGGAGCGCT ACTGGAAGGC CGGCTTCGCC CTCGGCGCCT CGCTGGAGAA CACCGTGGCG
GTCGGCGAGA CCGCGGTGGT CAATCCCGAG GGCCTGCGCT TCCAGGACGA GTTCGTCCGC
CACAAGATCC TCGACGCCAT CGGCGACCTC GCCCTGGCCG GCCTGCCGAT CCAGGGCGCC
TACCGCTCCT ATTGCGGCGG CCACCGGATG AATGTCGGGG TGCTGTCCGC CCTCTTCGCC
GACCGGGCGA ACTACGCCGT CGTCGAGGCG CAGGGCTCGC GCCGCGAGAC CGTGCTGTCC
GAGCTCGGCG TCGGCCTCGG CATCGCCGCC TTCGCGGGCG ACCTGTAG
|
|---|
| Protein sequence | MRTHKQTTLK GPATLSGIGV HSGNPAEITI RPAPANHGIA FLRTGTTHGN DRLIKAHHAL
VSATELCTVL GDVETGAVAT VEHLMSALYG LGVDNALIEI DGPEMPILDG SALPFVQAID
QIGIATCDTP RRWLKILRHV RIEAGTSFAE LRPIDRGFRL DVEIDFESPV IGRSRKAMDL
SPATYRREIA GARTFGMMRD VERYWKAGFA LGASLENTVA VGETAVVNPE GLRFQDEFVR
HKILDAIGDL ALAGLPIQGA YRSYCGGHRM NVGVLSALFA DRANYAVVEA QGSRRETVLS
ELGVGLGIAA FAGDL
|
|---|
| |