| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_2191 |
|---|
| Symbol | |
|---|
| ID | 6138223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 2336500 |
|---|
| End bp | 2337519 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641627901 |
|---|
| Product | DNA-directed RNA polymerase subunit alpha |
|---|
| Protein accession | YP_001754869 |
|---|
| Protein GI | 170748609 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
|---|
| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.441743 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTCATTC AGAAGAATTG GCAGGAACTG ATCAAGCCGA ACAAGCTGCA GGTCACGACC
GGCGACGACC CCAAGCGGGT CGCCACGGTC GTCGCCGAGC CGCTCGAGCG CGGCTTCGGC
ACGACGCTGG GCAACGCCCT GCGCCGCGTG CTCCTGTCGT CGCTCCAGGG CGCGGCCGTG
ACCTCGGTGC AGATCGACGG CGTGCTGCAC GAGTTCTCGT CGATCCCGGG CGTGCGCGAG
GACGTCACCG ACATCGTCCT CAACATCAAG ACCATCGCGA TCCGCTCGCA GACCGACGCG
CCCAAGCGCA TGACCCTGCG CAAGACCGGC CCGGGCCTCG TCACCGCCGG TGACATCGGC
ACGGTCGGCG ACATCCAGAT CCTGAACCCC GACCTCGTGA TCTGCACGCT CGACGACGGC
GCCGAGATCC GCATGGAGTT CACGGTCGCC ACCGGCAAGG GCTACGTCCC GGCCGAGCGC
AACCGCCCCG AGGACGCGCC GATCGGCCTG ATCCCGGTGG ATTCGCTGTT CTCGCCGGTC
ACCAAGGTCA GCTACCGCGT CGAGACCACC CGCGAGGGCC AGGATCTCGA CAAGGACAAG
CTGACCATGA CGGTCGAGAC CAACGGCGCG GTCTCGCCGG AGGATGCCCT GGCCTACGCC
GCGCGCATCA TCCAGGACCA GCTGCAGGTC TTCGTGAACT TCGAGGATCC GCGCAAGGAA
GAGGCCGCGC CGCTCGCGCC GCAGCTGCCC TTCAACCCTG CGCTGCTCAA GAAGGTCGAC
GAGCTGGAGC TGTCGGTCCG CTCGGCGAAC TGCCTGAAGA ACGACAACAT CGTCTACATC
GGAGACCTGA TCCAGAAGTC CGAGGGCGAG ATGCTGCGGA CCCCGAACTT CGGCCGCAAG
TCGCTCAACG AGATCAAGGA AGTGCTCGCC GGCATGGGCC TGCACCTCGG CATGGACATC
CCCGGCTGGC CGCCGGAGAA CATCGAGGAT CTCGCCAAGC GCTTCGAAGA ACACTACTGA
|
|---|
| Protein sequence | MVIQKNWQEL IKPNKLQVTT GDDPKRVATV VAEPLERGFG TTLGNALRRV LLSSLQGAAV
TSVQIDGVLH EFSSIPGVRE DVTDIVLNIK TIAIRSQTDA PKRMTLRKTG PGLVTAGDIG
TVGDIQILNP DLVICTLDDG AEIRMEFTVA TGKGYVPAER NRPEDAPIGL IPVDSLFSPV
TKVSYRVETT REGQDLDKDK LTMTVETNGA VSPEDALAYA ARIIQDQLQV FVNFEDPRKE
EAAPLAPQLP FNPALLKKVD ELELSVRSAN CLKNDNIVYI GDLIQKSEGE MLRTPNFGRK
SLNEIKEVLA GMGLHLGMDI PGWPPENIED LAKRFEEHY
|
|---|
| |