Gene Mrad2831_2171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_2171 
Symbol 
ID6138203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp2313159 
End bp2314490 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content76% 
IMG OID641627881 
Product2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
Protein accessionYP_001754849 
Protein GI170748589 
COG category[I] Lipid transport and metabolism 
COG ID[COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase 
TIGRFAM ID[TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.577736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCA CCGGCACGCC AGCCACCGGA CCCGCCAGCG CGGGAGCCGG CGTCGCCGCG 
GTTGTGGTGG CGGCCGGGCG CGGCATCCGC ATCGGCGGCG GCACGCCCAA GCAGTACCGC
CGGGTCGGCG GGCAGGCGGT CCTGACCCGC ACCCTGGCGG CGCTGGCGGC GGACGACGCG
ATCGCGCGGA TCCAGCCGGT GATCGCCGCC GACGCGGCGG ACTTCTTCCG CAGCTGCCTG
GAGGAGCTCG CGCCCGCGAT CCGTGCCAAG ATCACCACGC CGGTCGAGGG CGGCGCGACG
CGCCAGCTCT CCGTGCGCGC CGGTCTCGAG GCGCTGGCCG CCGGCGACGC GCCCGAGATC
GTGCTCGTCC ACGATGCCGC CCGTCCCTAC GTGGATTCCG CGCTGATCGC CCGGGCGATC
GCGGCCGGGC GCGACCACGG CGCGGCCGTT CCGGGCGTGC CGGTGACCGA CACGGTCAAG
CGCGTCGTCG ACATCGCGCC CGGCATCGGC CGGGTGCACG AGACCCCGCC GCGGGAGCAC
CTGCGCGCGG TCCAGACCCC CCAGGCCTTC GTCTTCGGCC CGCTCCTCGG CGCCCACCGG
GACGCCGCCG CGCAGGGCCT CGACGGCTTC ACCGACGACG GCGCCCTCGC TGAATGGGCC
GGGCTGCCTG TGGTCGTCTT TGCGGGCGAC GTCGCCAACC GCAAGATCAC CCAGCCCGCC
GACCTGATCG AGGCGGATCG CGCCTTCGCG ACCGCCACCA CCGACTTGCC AGCGCCGGGA
GCCCGCGCCA TGACCACCTA CGTGACCCGC CTCGGCACCG GCTTCGACGT GCACGCCTTC
ACCACCGGCG ACCATGTCTG GCTGGGTGGG GTGAAGATCC CGGCCGATCG CGGCGTGCTC
GCCCATTCGG ACGGTGACGT CGCGCTGCAC GCCCTGACCG ACGCCCTGCT CGGCGCCATC
GCGGACGGCG ATATCGGCAC GCACTTCCCG CCCTCCGACG AGCGCTGGCG CGGCGCGTCC
TCGGACCAGT TCCTGGCCCA TGCCTGCGAC CTGGTCCGCG CCCGCGGCGG CCGCATCGAC
CACCTCGACA TCACCGTGCT CGCCGAGGCA CCGCGCATCG GCAAGCACCG CGAGGAGATC
CGCGCGCGGA TCGCCGCCAT CGCGGGCGTG CCGCTCGGCG CGGTGTCCAT CAAGGCGACG
ACCACCGAGA AGCTCGGCTT CGTCGGCCGG GCGGAGGGGC TCGCCGCCCA GGCGGCCGCG
ACGGTCCGGC TGCCCGAGGA GGACGGTCCC GCCCTCGACG CGCAGGCCGA AACCGCGATG
CGGCAGGGCT GA
 
Protein sequence
MPATGTPATG PASAGAGVAA VVVAAGRGIR IGGGTPKQYR RVGGQAVLTR TLAALAADDA 
IARIQPVIAA DAADFFRSCL EELAPAIRAK ITTPVEGGAT RQLSVRAGLE ALAAGDAPEI
VLVHDAARPY VDSALIARAI AAGRDHGAAV PGVPVTDTVK RVVDIAPGIG RVHETPPREH
LRAVQTPQAF VFGPLLGAHR DAAAQGLDGF TDDGALAEWA GLPVVVFAGD VANRKITQPA
DLIEADRAFA TATTDLPAPG ARAMTTYVTR LGTGFDVHAF TTGDHVWLGG VKIPADRGVL
AHSDGDVALH ALTDALLGAI ADGDIGTHFP PSDERWRGAS SDQFLAHACD LVRARGGRID
HLDITVLAEA PRIGKHREEI RARIAAIAGV PLGAVSIKAT TTEKLGFVGR AEGLAAQAAA
TVRLPEEDGP ALDAQAETAM RQG