| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_2170 |
|---|
| Symbol | |
|---|
| ID | 6138202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 2311962 |
|---|
| End bp | 2312987 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641627880 |
|---|
| Product | NifR3 family TIM-barrel protein |
|---|
| Protein accession | YP_001754848 |
|---|
| Protein GI | 170748588 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0042] tRNA-dihydrouridine synthase |
|---|
| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.565467 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGACTG ACCATTATTT GAGCGCGCTG CGCCGCGAGG ATGCGAAGGC TGAAGCGGCA
GGCACCGCCC CGCTCTGCCT GCTCGCCCCC CTTTCCGGCG TCACCGACCT TCACATGCGC
CGCATTGCCC GCCGCTGCGG TGCTGACGCG GTCATTTCCG AGATGGTGGC GGCCCGGGAA
TTCACCCGCG GATCCGGCGA GGCCACACTG CGCGCCGAGG GTTCCGGCGT CGACCTGCAC
GTTGTCCAGC TCGCGGGCTG CGAGGCGGGC CCAATGGCGG AGGCCGCGCG GCTCGCGGAG
GCCGGGGGCG CCGACGTGAT CGACGTGAAC ATGGGCTGCC CGGCCAAGAT CGTGACGGGG
ATCGCCTCGG GCTCGGCGCT CATGCGCGAC CTCGACCACG CCGAGCGCCT GCTCGCGTCC
GTGCGGGGCG CCGTGTCGAT CCCGGTGACC GTCAAGATGC GCCTCGGCTG GGACGACGCG
AGCCGCAACG CCGCGGATCT CGCCGCCCGC GCCGAGCGGC TGGGCCTGAA CGCCGTGACG
GTCCACGGGC GGACGCGGCA GCAATTCTAC AAAGGACGCG CCGACTGGGC GGCGATCCGC
GCCGTGGTCG CGGCGGTGTC GATCCCGGTG ATCGCCAACG GTGACGTGAC CGACTTCGCC
AGCGCCCGCG CTTGCCTGGA CGCCTCGGGC GCCGCCGGGG TCATGATCGG CCGCGCGGCG
ACCGGCCGCC CCTGGCTGGT CGGGCAGGTC GCCGCCGCGC TCACGGGCCG GCCGGCCGCG
GAGCCGTCGC GGTCCGAACA GGCCGCCCTG GCCGCGGAGC ACTATGCGGG GCTGCTCTCC
CTCTACGGCC GCGACATGGG CGTGCGCCAC GCGCGCAAGC ACCTCGCCGC CTATGCCGAG
ACCGGCGGCG CGCTCGATCC GGCCGAACGG TCGGCCCTCC TGACCACCAC CGATCCGGAG
ACGGCGCTCG CCTTGCTGGC CCGCGCCTTC GCGGATGCGG CCGATCCCGT CCAGGAGGCC
GCGTGA
|
|---|
| Protein sequence | MMTDHYLSAL RREDAKAEAA GTAPLCLLAP LSGVTDLHMR RIARRCGADA VISEMVAARE
FTRGSGEATL RAEGSGVDLH VVQLAGCEAG PMAEAARLAE AGGADVIDVN MGCPAKIVTG
IASGSALMRD LDHAERLLAS VRGAVSIPVT VKMRLGWDDA SRNAADLAAR AERLGLNAVT
VHGRTRQQFY KGRADWAAIR AVVAAVSIPV IANGDVTDFA SARACLDASG AAGVMIGRAA
TGRPWLVGQV AAALTGRPAA EPSRSEQAAL AAEHYAGLLS LYGRDMGVRH ARKHLAAYAE
TGGALDPAER SALLTTTDPE TALALLARAF ADAADPVQEA A
|
|---|
| |