Gene Mrad2831_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_1890 
Symbol 
ID6137919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp2017559 
End bp2018458 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content71% 
IMG OID641627597 
Productdihydrodipicolinate synthase 
Protein accessionYP_001754568 
Protein GI170748308 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.684525 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00443195 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGAGA TGACCGGGAG CCGCCTGCGG GGCTCGCTCA CCGCGCTTGT GACGCCCTTC 
CGCGACGGGG CCTTCGACGA GGCCGCGTTC CGAAAGTTCG TGCGCTGGCA GATCGAGCAG
GGCAGCCACG GCCTCGTGCC CACCGGCACC ACCGGCGAGA GCCCGACCCT CACCCATTCC
GAGCACGACC GGGTGGTCGA GGCCTGCATC GACGAGGCGG GCGGGCGCGT GCCGGTCGTG
GCAGGCGCGG GCTCCAACTC GACGGCCGAG GCGGTCGAGC GGGCGCAGCA CGCCGAGCGC
GCGGGCGCCG ACGCCGTCCT CGTGGTGACG CCGTACTACA ACAAGCCGAC GCAGGCGGGC
CTCTACGCCC ACTTCAAGGC CGTCAACGAT GCGGTCGGCA TTCCGATCAT CATCTACAAC
ATCCCGCCGC GCTCCGTCAT CGACATGAGC GTCGAGACGA TGGCCCGGCT CTTCGAGCTG
AAGAACATCG CCGGCGTGAA GGACGCGACC GCCAAGATCG ACCGCGTCAG CCAGCAGCGT
CAGGCCATGG GCGACAGCTT CATCCAGCTT TCGGGCGAAG ATGCGACGGC GCTCGGCTAC
AACGCCCACG GCGGCCACGG CTGCATCTCG GTGGTGGCGA ACGTCGCCCC GCGCCTCTGC
GCCGACCTCC AGGAGGCGAC GCTCGCGGGC GACTACGCCA AGGCGCTGAC CCTCCAGGAC
AGGCTGTTCC CGCTGCAGAC GGGCCTGTTC GCCGAGGCCA ACCCGGCGCC GGTGAAGTAC
GCGCTGTCGC GGCTCGGCCA CATGACCGAC GAGCTGCGCC TGCCGCTCGT GCCGGTGACC
GAGCCCACCA AGCGCATCGT CGACGACGCC CTGCGCCACG CCGGCCTGCT GGTCGACTGA
 
Protein sequence
MTEMTGSRLR GSLTALVTPF RDGAFDEAAF RKFVRWQIEQ GSHGLVPTGT TGESPTLTHS 
EHDRVVEACI DEAGGRVPVV AGAGSNSTAE AVERAQHAER AGADAVLVVT PYYNKPTQAG
LYAHFKAVND AVGIPIIIYN IPPRSVIDMS VETMARLFEL KNIAGVKDAT AKIDRVSQQR
QAMGDSFIQL SGEDATALGY NAHGGHGCIS VVANVAPRLC ADLQEATLAG DYAKALTLQD
RLFPLQTGLF AEANPAPVKY ALSRLGHMTD ELRLPLVPVT EPTKRIVDDA LRHAGLLVD