| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_1851 |
|---|
| Symbol | |
|---|
| ID | 6137880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | + |
|---|
| Start bp | 1979649 |
|---|
| End bp | 1981094 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 641627558 |
|---|
| Product | Fis family transcriptional regulator |
|---|
| Protein accession | YP_001754529 |
|---|
| Protein GI | 170748269 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR02040] transcriptional regulator PpsR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.000460761 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGACCGTGA CCCCTCAGCC CCGCCCCTCC CCGCAGTCGC CGCCCGCGGC CCTGCAGCAG
GTGGCCGGCC TCCTCCAGGG CGAGGCGGTC GGGCGCATCG TCGCGGCGTC CGCGGACCTC
TCCCTGGTGA TCGACGCCGA CGGGGTGATT CGGGACGCCG CGGTCGGCGC CGACCTCGCG
GCCGAGACCG TGGCGGGCTG GCTGGGCCGG CGCTGGATCG ACACCGTCAC GGTGGAGAGC
CGCCCGAAGA TCGACGCCCT GCTGCGGGAT GCCGGGACCG AGGGCATCAC CCGCTGGCGC
CAGGTGAACC ACCCCTCGCC CGACGGCGCC GACCTGCCGA TCCGCTACGC GTCGATCCGG
CCCTCGGAGG GCGGCCCGAT CCTCGTGCTC GGGCGCGACA TGCGGGCGGT GGCGGCCCTG
CAGCGCCGGC TGGTCGAGAC CCAGCAGGCC CTGGAGCGGG ACTACGACCG GCTCCGCGCC
GCCGAGACCC GCTACCGGCT GCTGTTCCAG ATCTCCGGCG AGCCGGTGCT GGTGGTCGAT
GCCGGCACGC GCCGGGTGGC CGAGGCCAAC CCGGCGGCGG CGCGCCTCCT CGGGCGCCCG
GCCAAGCGCA TCGCCGGGCA GGACGCCGTC GAGCTGTTCG ACCCCGCCAG CACCCGGACC
CTGGAGGCCC AGTTCGCCGC CCTGCGGGCG ACCGGGCAGG CGGGCGAGAT CCGGGCGGCG
CTCCAGCACG GGCGCGGCGA GGTCACGGTC TCGGCCTCGC TGTTCCGGGG CGAGGGCGGC
GCGAGCGCCC TGCTGCAGCT GGCCGCCGAC CCGGCGGCCG CGGCGGCCGG GCCCGACCAG
GAGGCGCCGA CCGCCGCGGT GATCGAGGCG ATGCCGGAGG GCTTCGTGGT CACCGATTCG
GCGCGGCGGG TCCTGATGGC CAACGCCGCC TTCCTGGAGC TGGCGCAGCT CGCCACCGTG
GGCCAGGCCC GCGGGCGCAC CCTCGACCAC TGGCTCGGCC GCGACGAGAC CGAGGCGCAG
GCGCTGTTCG CGACCCTCGT CGACCACGGC GCCGTGCGCC GCTTCGCCAC CGTCGTCCGC
GGCGCCTACG GCGGCATGGA GGACGTGGAG GTCGCCGCCG TGTCGGTGGC CGGGACCCGC
CCCTGCTTGG GCTTCGCCAT CCGGTCGGGC CCGCGGCGGA TCGCCGAGGG ACGTCCCGGG
GTCGGTCGGG AGGTGCCCCG CTCGGTGGAG CAGATGACCG AGCTCGTGGG CCGGGTCTCG
ATGAAGACCC TGGTCCGCGA GACGACGGAC CTGATCGAGA AGCTCTGCAT CGAGGCGGCG
CTGCGGATCA CCCGGGACAA CCGGGCCTCG GCGGCCGAGA TGCTCGGCCT GAGCCGGCAG
GGCCTCTACG CCAAGATGCG CCGCTACGGC GTCGGCGACC TCGACGGCCC GGTCGAGGAG
GCCTGA
|
|---|
| Protein sequence | MTVTPQPRPS PQSPPAALQQ VAGLLQGEAV GRIVAASADL SLVIDADGVI RDAAVGADLA
AETVAGWLGR RWIDTVTVES RPKIDALLRD AGTEGITRWR QVNHPSPDGA DLPIRYASIR
PSEGGPILVL GRDMRAVAAL QRRLVETQQA LERDYDRLRA AETRYRLLFQ ISGEPVLVVD
AGTRRVAEAN PAAARLLGRP AKRIAGQDAV ELFDPASTRT LEAQFAALRA TGQAGEIRAA
LQHGRGEVTV SASLFRGEGG ASALLQLAAD PAAAAAGPDQ EAPTAAVIEA MPEGFVVTDS
ARRVLMANAA FLELAQLATV GQARGRTLDH WLGRDETEAQ ALFATLVDHG AVRRFATVVR
GAYGGMEDVE VAAVSVAGTR PCLGFAIRSG PRRIAEGRPG VGREVPRSVE QMTELVGRVS
MKTLVRETTD LIEKLCIEAA LRITRDNRAS AAEMLGLSRQ GLYAKMRRYG VGDLDGPVEE
A
|
|---|
| |