| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_1373 |
|---|
| Symbol | |
|---|
| ID | 6137392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | + |
|---|
| Start bp | 1434216 |
|---|
| End bp | 1435445 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 641627073 |
|---|
| Product | RND family efflux transporter MFP subunit |
|---|
| Protein accession | YP_001754054 |
|---|
| Protein GI | 170747794 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.000149577 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCG CCGCCGTCCT CGTCGCCCCC GCGCTGCTGG CGCTCGGCCT GTCGGCCGCC
TCCGCCCGCG ACGAGGCCGC CGCCGCGCTC AAGCCGTTGC CCGCGCCCGC GGTCAGCGTC
GTCGAGGCGA CGCGGCGCGA GACCGTGGAG ACCGTGACGG TGACCGGGAC CCTGGTGCCC
CGCGACGAGA TCCTGGTGAC GCCCGAGATC GACGGCTACC GGGTCACCGA GGTGCTGGTC
GAGGAGGGCG CGCGCGTCAC CAAGGGTCAG GTGCTCGCGC GCCTCGCCCG CGACCTCATC
GACCGCCAGA TCGCCCAGCA GGACGCGGTG GTGGCCAAGG CCGAGGCCGC CGTGCCCCAG
TCCCAGAGCA GCATCGAGCA GGCCGAGGCC GCCGCGACCG AGGCCCGGCT CAGCCTGGAT
CGGGCCAAGA CGCTCATATC CACGGGCAAC ACCACCGCCG TGGTGATGGA GACCCGGACC
TCTGCCCTGC GCCAGGCCGA GGGCCGGCTC GCCTTCGCCC GCAACGGGCT GGCCATGGCC
AGGGCCGACC TCGCCCAGGC CCGCGCCGTG CGCGACGAGC TGTCCCTGCG GCTGGCCCGC
ACGGAGATCC GCGCTCCCGT GGACGGCATC GTCAGCCGCC GCACCGCCCG GGTCGGCCTC
GCCGCCTCGG CCGCGTCCGA GCCCCTGTTC CGCCTGATCG CCCGCGGCGA GATCGAGCTC
GAGGGCGAGA TCGTCGAGAC CAAGCTGCCC CTGCTGCGCG AGGGCGCCCC GGCCTGGATC
GATCTCGGCG AGAGCGGCCG CGTCGCGGGC CGCGTGCGGG CCGTCTACCC CGAGGTCGAC
AAGGCCACCC GCCTTGGCAA GGTGCGCGTG CGCCTCGATC CCGACCCGCG CCTGCGCATC
GGGACCTTCG CCCGCGGCGG GGTCGAGCTC GGCCGCAGCC GCGGCGTGAG CGTCCCCCAG
GCCTCCGTGC TCTACGGCGG CGGACGCCGC AGCGTGCTCG CTGTCGCCGG CGACCGGGTC
GAGGACCGCA CCGTGCGCAC CGGCATCGCC GACGAGGACA CCATCGAGAT CCGCGCAGGC
CTCAACGAGG GCGAGCGCGT CGTGGCCCGG GCCGGCTCGT TCCTGCGTGA CGGCGACCGG
GTCCGGCCGG TCCTCGAGGC CCCGCCCCCC GCGCCCGCGG TCGCCGCGGT GCCCGCGCCG
CGGGACACCG CCGAAGCCGG CGTGCCTTAA
|
|---|
| Protein sequence | MTRAAVLVAP ALLALGLSAA SARDEAAAAL KPLPAPAVSV VEATRRETVE TVTVTGTLVP
RDEILVTPEI DGYRVTEVLV EEGARVTKGQ VLARLARDLI DRQIAQQDAV VAKAEAAVPQ
SQSSIEQAEA AATEARLSLD RAKTLISTGN TTAVVMETRT SALRQAEGRL AFARNGLAMA
RADLAQARAV RDELSLRLAR TEIRAPVDGI VSRRTARVGL AASAASEPLF RLIARGEIEL
EGEIVETKLP LLREGAPAWI DLGESGRVAG RVRAVYPEVD KATRLGKVRV RLDPDPRLRI
GTFARGGVEL GRSRGVSVPQ ASVLYGGGRR SVLAVAGDRV EDRTVRTGIA DEDTIEIRAG
LNEGERVVAR AGSFLRDGDR VRPVLEAPPP APAVAAVPAP RDTAEAGVP
|
|---|
| |