Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_1155 |
Symbol | |
ID | 6137173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | + |
Start bp | 1216000 |
End bp | 1218120 |
Gene Length | 2121 bp |
Protein Length | 706 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641626865 |
Product | type VI secretion system Vgr family protein |
Protein accession | YP_001753847 |
Protein GI | 170747587 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0542625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.843476 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCCC TGCCCGCCGA GATCACCCAG CCGCTGAGCG CGGTCGAGCG CGACTTCACC CTCGCGTTCA CCGCCGACGG CCTGCCGGAC GCCGATCTCG CGGTCACGGG CTTCCGCCTG GAGGAGGCGA TCTCGAGCCT GTTCCAGGCC GAGATCGCCC TGGCCTCGCC CGACCCGGGG CTGGACCTGA CCGCGCTCCT CGACAAGCCG GCGCGGCTCA CCGTGCTCGA CCGCTACGGC CCGCCCCGCC ACGTCCACGG CGTGCTCGCC CTGGCCGAGC GCGGCGACAC CGGCGCGCAC CACACGCGCT ACTCCGTCCT GCTCATGCCG GCGCTGCACC GCCTGCGCTT TGCCGCCGAT TGCCGGATCT TCCAGGCGAA GCGCGTGCCC GAGATCGTCG AGGCGGTGCT CGAGGAGACC GGCGTCACCG CCTACCGCTT CGCGCTGACC GAGCCGCACC CCGCGCGCGA GTACTGCGTG CAGTACCGGG AGACCCACCT CGCCTTCATC GAGCGGCTGC TGGCCGAGGA GGGCATCGCC TACCACTTCG AGCATACGGA GGGCGCCCAC ACCCTGGTGC TCACCGACGC GACCAAGCTG GCGGCGGACG CGCCGGGCGC GGAGGCGATC GAGTACAACG CCGAGCCGGG CGGCACGGTG AAGGGCCCGC ATGTCGGGCG GTTCACGTGG CGGGAGGTGG TGGCGCCCTC CGACGTGGTG CAGCGCGACC ACTTCTTCCG CAACCCCGTG CACGACTTCG AGGCGCGGGC GCAGGCGAGC GTGCTCAACG GCCTGACGCG CAAGCTGGAG ATGTACGACT ACCCCGGGCG GTACAAGGCG GACGCGGTGG GTCGGGCGTT CACGCGCTAC CGGCTGGAGG GGTTCCGGGC TGAGGCGAGC CACGGCGAGG GCGCGGGGCG GTGCGCGCGG CTGCTGCCGG GGCACCGGGT CGCGCTGACC GGGCATCCCG ACCCGGCGCT GAACCGGCGG TTCCTGGTGG CGGCGGCGAG CCACGCCGGC AGCCAGCCGG GGGCAGCGGA GGGCGATGCC GGCGACGGCG GCGCGTACCT GACCACGTCG TTCCGGGTGA TCCGGCACGA CACGCCGTAC CGGCCTGACG CGCCCGCCAA GCCGCGGGTG GAGGGCCCGC AGATGGCGAT CGTGACCGGT CCGGCGGGCG AGGAGATCCA CTGCGACGCG TTCGGCCGGG TGAAGGTGCG CTTTCCCTGG GACCGGTCGG GGCGGGCGGA CGACACGGCC TCGTGCTGGA TCCGGGTGAG CCAGGGCTGG GCGGGGGCGA GCTGGGGCCA GATGGCGCTG CCGCGGGTCG GCCAGCACGT GATCGTGGAC TTCCTGGAGG GCGATCCCGA CCAGCCGATC ATCACGGGCC GGGCCTACAA CGCGCGCGAG CCGGTGCCGT ACCCGCTGCC GGCCAACAAG ACGCGGATGA CGATCCGGTC GAAGACGCAC AAGGGCGAGG GGTTCAACGA GCTGCGGTTC GAGGACGAGC AGGGCCGGGA GGAGGTGTTC GTCCACGCGC AGAAGGATCG AAACGAGAAG GTCAGGAACA ATCACTCTGA AAGGATCGAC AACAACTGGG TGCAATCCGT CGGCAACAAC AAGTCTGTCG AGGTGCGATC AAATCACAAC GAGGCAATCG GTGGAAATAT GACCCTGACC GTGGGCTCCA CCGCCATCGG TTCGATCGTT GAACGTGGGC TGACAGCGTT GAGCCAAGGC ATCGGCTCCG TAGCCAGCGC TCTTGGAACG ATTGGGAAAG CCGCTTTGGG TGGCAATATG ATTACTTTCA TTGAAAAAAA CAAATCCGAT ACAATTGGTG CCGTGCATTT CGAGCAAATC GGGATGGCTA AGTACACCCA TATTGGCACG GCATGGGAAC TTACCAGTGG ATCATCGATC AGCTTGACCG CGAGTGCGAA ATTCACAGAA AATGTCGGCA GAGACAAACT CGTCCAAGCG GGTAATGAGA TAAGTTTTAG CACTGGAAAA TCAAGGCTTA CACTGAAAGC AAGCGGTGAA ATCCATCTAA CTGGCACTGA ACTAGTTTTT GACGGAAGGA AATCGGTCAA AATTTCTGGT CAGAAAATTA AGCTGAATTA A
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Protein sequence | MIALPAEITQ PLSAVERDFT LAFTADGLPD ADLAVTGFRL EEAISSLFQA EIALASPDPG LDLTALLDKP ARLTVLDRYG PPRHVHGVLA LAERGDTGAH HTRYSVLLMP ALHRLRFAAD CRIFQAKRVP EIVEAVLEET GVTAYRFALT EPHPAREYCV QYRETHLAFI ERLLAEEGIA YHFEHTEGAH TLVLTDATKL AADAPGAEAI EYNAEPGGTV KGPHVGRFTW REVVAPSDVV QRDHFFRNPV HDFEARAQAS VLNGLTRKLE MYDYPGRYKA DAVGRAFTRY RLEGFRAEAS HGEGAGRCAR LLPGHRVALT GHPDPALNRR FLVAAASHAG SQPGAAEGDA GDGGAYLTTS FRVIRHDTPY RPDAPAKPRV EGPQMAIVTG PAGEEIHCDA FGRVKVRFPW DRSGRADDTA SCWIRVSQGW AGASWGQMAL PRVGQHVIVD FLEGDPDQPI ITGRAYNARE PVPYPLPANK TRMTIRSKTH KGEGFNELRF EDEQGREEVF VHAQKDRNEK VRNNHSERID NNWVQSVGNN KSVEVRSNHN EAIGGNMTLT VGSTAIGSIV ERGLTALSQG IGSVASALGT IGKAALGGNM ITFIEKNKSD TIGAVHFEQI GMAKYTHIGT AWELTSGSSI SLTASAKFTE NVGRDKLVQA GNEISFSTGK SRLTLKASGE IHLTGTELVF DGRKSVKISG QKIKLN
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