Gene Mrad2831_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_1005 
Symbol 
ID6137022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp1061250 
End bp1063934 
Gene Length2685 bp 
Protein Length894 aa 
Translation table11 
GC content71% 
IMG OID641626714 
ProductDNA topoisomerase I 
Protein accessionYP_001753697 
Protein GI170747437 
COG category[L] Replication, recombination and repair 
COG ID[COG0550] Topoisomerase IA 
TIGRFAM ID[TIGR01051] DNA topoisomerase I, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.387965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.975115 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCG TCGTCGTCGA GTCGCCGGCC AAAGCCAAGA CGATCAATAA GTATCTCGGC 
CGCGACTATG AAGTCATCGC CTCCTTCGGG CACATCCGCG ACCTGCCGCC CAAGGACGGC
TCGGTGGATC CCGAGCAGGA TTTCCGCATG GTCTGGGAAC TGGCCGACCG CGGGGCGAGC
CGGGTCTCCG AGATCGCCAA GGCGGTCAAG GGCGCCGACA AGCTGATCCT CGCCACCGAC
CCGGATCGCG AGGGCGAGGC GATCTCCTGG CACGTGCTGG AGGCGCTCAC CGCCCGCAAG
GCGCTCAAGG GCATCCCGGT CGAGCGCGTG ACCTTCAACG CCATCACCAA GGCGTCGGTC
GAGCAGGCGA TGCGCAAGCC GCGCGAGATC GACCAGGCGC TGGTCGACGC CTACCTGGCG
CGCCGGGCGC TCGACTATCT CGTCGGCTTC AATCTCTCGC CGGTCCTGTG GCGCAAGCTG
CCGGGCGCCC GCTCGGCCGG GCGCGTGCAG TCCGTGGCGC TCCGGCTCGT GGTCGAGCGC
GAGATGGAGA TCGAGCGGTT CAAGCCGCGC GAGTACTGGA CGCTCATCGC GACCCTGACG
ACCGCCGACG GCGCGACCTT CGAGGCCCGG CTCGTGGGCG CGGACGGCAA GCGGATCCAG
CGCCTCGACG TCGGCACGGG CGAGGAGGCG GCCGCCTTCA GGCGCGACCT CGAGCTCGCG
ACCTTCCAGG TGGCGAGCGT CGAGGCCAAG CCCGCCAAGC GCCACCCGCA GCCGCCCTTC
ACCACCTCGA CCCTCCAGCA GGAGGCCTCC CGCAAGCTCG GCATGGCGCC GGCCCAGACC
ATGCGGGTCG CCCAGCGGCT CTACGAGGGC GTCGACATCG GCGGCGAGAC GGTCGGCATC
ATCACCTACA TGCGGACCGA CGGCGTCGAC ATGGCGCCGG AGGCGATCCA GGACGCCCGC
CGGGTCATCG GCAAGGAGTT CGGCGACCGC TACGTGCCGG ACGTGCCGCG CAAGTACAGC
GTCAAGGCCA AGAACGCCCA GGAGGCCCAC GAGGCGGTGC GTCCCACCGA CATGGGCCGC
CTGCCCAAGA CGGTGGCGCG CCACCTGGAG CCCGAGCAGG CCCGGCTCTA CGAGCTGATC
TGGACCCGCA CCATGGCGAG CCAGATGGAA TCGGCCGAGC TGGAGCGGAC CACCGTCGAC
GTCACCGCCA AGGTCGGGCC GCGGACCATC GACCTGCGCG CCACCGGCCA GGTGGTGAAG
TTCGACGGCT TCCTGACCCT CTACCAGGAG GGCAAGGACG ACGAGGAGGA CGAGGAGAGC
CGCCGCCTGC CGCCCATGAA GGCCGGCGAC CCCCTCACCC GCGAGCGCAT CAGCGCGACC
CAGCACTTCA CCGAGCCGCC GCCGCGCTAC TCCGAGGCGA GCCTCGTGAA GCGCATGGAG
GAGCTCGGCA TCGGCCGGCC CTCGACCTAC GCCGCGGTGC TCCAGACCTT GCGGGACCGC
GAGTACGTCA AGATCGAGAA GAAGCGGCTG CAGCCGGAGG ACAAGGGGCG GCTCGTCACG
GGCTTCCTGG AGAGCTTCTT CCGGCGCTAC GTCGAGTACG ACTTCACCGC CGGCCTCGAG
GAGCAGCTCG ACCGGGTCTC CAACGCCGAG ATCGACTGGC GGGCGGTGCT GCGCGACTTC
TGGCGCGACT TCTCCGCGGC GATCGGCGAG ACCAAGGAGC TGCGCGTCGC CGACGTGCTG
GAGGCGCTGA ACGGCCTTCT CGGGCCGCAC ATCTTCCCCG ACAAGGGCGA CGGCTCGAAC
CCGCGCACCT GCCCGACCTG CGGCTCGGGC CAGCTGTCGC TGAAGCTCGG CAAGTTCGGC
GCCTTCATCG GCTGCTCGAA CTACCCGGAG TGCAAGTACA CCCGCCAGCT CTCGGCCACG
GGCATCGACG GCGACGGGGA CGGCTCCTCG GCCGAGGGCG GCCAGCCGGG CGTGCGCGTG
CTGGGCGACG ATCCCGCGAC CGGCCTGCCG GTGACGCTCC GCGACGGCCG CTTCGGGCCG
TTCCTCCAGC TCGGCGAGGC CTCCACCGAG AAGGGCGCGG AGAAGCCGAA GCGCTCGTCG
CTGCCGAAGG GGCTGAGCCC CTCGGACGTG GATCTGAACA AGGCGCTGGC CCTGCTCGCG
CTGCCCCGCG AGGTGGCGCG CCACCCCGAG ACCGGCGAGC CGATCCTGGC CAATCTCGGC
CGGTTCGGGC CCTACGTGCA GCACGGGAAG ACCTACGCCA ATCTCGGCAA GGACGACGAC
GTGCTGGAGA TCGGGGCCAA CCGCGCCATC GACCTGATCG TCGCCAAGGA GCAGGGCGGC
GGCCGCGGCC GCCTGGCCGC CGATCCGGGC CGGCCGCTCG GCAAGGACGA GGCTAGCGGC
CGAGACCTCG TGGTCAAGGC CGGCAAGTAC GGGCCCTACG TCACCGACGG CGAGGTCAAC
GCCACGCTGC CGAAGACGAT GAGCGCCGAG GCGCTGACGC TGGACGAGGC GATCGCCCTG
GTGAACGCCA AGCGCGCCGC GGGCGGCGGC AAGCCGGCGA AGCGGGGGGC GGCCCGGAAG
AGTTCGGCGC GCGCCGCGAG CGGCGACAAG CCGGCGGCGA AGAAGACCGC CACGAAGAAG
CCGGCGGCCA AGAAGGCGGC GACCAAGAAA TCGAGCTCGG GCTGA
 
Protein sequence
MKVVVVESPA KAKTINKYLG RDYEVIASFG HIRDLPPKDG SVDPEQDFRM VWELADRGAS 
RVSEIAKAVK GADKLILATD PDREGEAISW HVLEALTARK ALKGIPVERV TFNAITKASV
EQAMRKPREI DQALVDAYLA RRALDYLVGF NLSPVLWRKL PGARSAGRVQ SVALRLVVER
EMEIERFKPR EYWTLIATLT TADGATFEAR LVGADGKRIQ RLDVGTGEEA AAFRRDLELA
TFQVASVEAK PAKRHPQPPF TTSTLQQEAS RKLGMAPAQT MRVAQRLYEG VDIGGETVGI
ITYMRTDGVD MAPEAIQDAR RVIGKEFGDR YVPDVPRKYS VKAKNAQEAH EAVRPTDMGR
LPKTVARHLE PEQARLYELI WTRTMASQME SAELERTTVD VTAKVGPRTI DLRATGQVVK
FDGFLTLYQE GKDDEEDEES RRLPPMKAGD PLTRERISAT QHFTEPPPRY SEASLVKRME
ELGIGRPSTY AAVLQTLRDR EYVKIEKKRL QPEDKGRLVT GFLESFFRRY VEYDFTAGLE
EQLDRVSNAE IDWRAVLRDF WRDFSAAIGE TKELRVADVL EALNGLLGPH IFPDKGDGSN
PRTCPTCGSG QLSLKLGKFG AFIGCSNYPE CKYTRQLSAT GIDGDGDGSS AEGGQPGVRV
LGDDPATGLP VTLRDGRFGP FLQLGEASTE KGAEKPKRSS LPKGLSPSDV DLNKALALLA
LPREVARHPE TGEPILANLG RFGPYVQHGK TYANLGKDDD VLEIGANRAI DLIVAKEQGG
GRGRLAADPG RPLGKDEASG RDLVVKAGKY GPYVTDGEVN ATLPKTMSAE ALTLDEAIAL
VNAKRAAGGG KPAKRGAARK SSARAASGDK PAAKKTATKK PAAKKAATKK SSSG