Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_1005 |
Symbol | |
ID | 6137022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | - |
Start bp | 1061250 |
End bp | 1063934 |
Gene Length | 2685 bp |
Protein Length | 894 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641626714 |
Product | DNA topoisomerase I |
Protein accession | YP_001753697 |
Protein GI | 170747437 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.387965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.975115 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTCG TCGTCGTCGA GTCGCCGGCC AAAGCCAAGA CGATCAATAA GTATCTCGGC CGCGACTATG AAGTCATCGC CTCCTTCGGG CACATCCGCG ACCTGCCGCC CAAGGACGGC TCGGTGGATC CCGAGCAGGA TTTCCGCATG GTCTGGGAAC TGGCCGACCG CGGGGCGAGC CGGGTCTCCG AGATCGCCAA GGCGGTCAAG GGCGCCGACA AGCTGATCCT CGCCACCGAC CCGGATCGCG AGGGCGAGGC GATCTCCTGG CACGTGCTGG AGGCGCTCAC CGCCCGCAAG GCGCTCAAGG GCATCCCGGT CGAGCGCGTG ACCTTCAACG CCATCACCAA GGCGTCGGTC GAGCAGGCGA TGCGCAAGCC GCGCGAGATC GACCAGGCGC TGGTCGACGC CTACCTGGCG CGCCGGGCGC TCGACTATCT CGTCGGCTTC AATCTCTCGC CGGTCCTGTG GCGCAAGCTG CCGGGCGCCC GCTCGGCCGG GCGCGTGCAG TCCGTGGCGC TCCGGCTCGT GGTCGAGCGC GAGATGGAGA TCGAGCGGTT CAAGCCGCGC GAGTACTGGA CGCTCATCGC GACCCTGACG ACCGCCGACG GCGCGACCTT CGAGGCCCGG CTCGTGGGCG CGGACGGCAA GCGGATCCAG CGCCTCGACG TCGGCACGGG CGAGGAGGCG GCCGCCTTCA GGCGCGACCT CGAGCTCGCG ACCTTCCAGG TGGCGAGCGT CGAGGCCAAG CCCGCCAAGC GCCACCCGCA GCCGCCCTTC ACCACCTCGA CCCTCCAGCA GGAGGCCTCC CGCAAGCTCG GCATGGCGCC GGCCCAGACC ATGCGGGTCG CCCAGCGGCT CTACGAGGGC GTCGACATCG GCGGCGAGAC GGTCGGCATC ATCACCTACA TGCGGACCGA CGGCGTCGAC ATGGCGCCGG AGGCGATCCA GGACGCCCGC CGGGTCATCG GCAAGGAGTT CGGCGACCGC TACGTGCCGG ACGTGCCGCG CAAGTACAGC GTCAAGGCCA AGAACGCCCA GGAGGCCCAC GAGGCGGTGC GTCCCACCGA CATGGGCCGC CTGCCCAAGA CGGTGGCGCG CCACCTGGAG CCCGAGCAGG CCCGGCTCTA CGAGCTGATC TGGACCCGCA CCATGGCGAG CCAGATGGAA TCGGCCGAGC TGGAGCGGAC CACCGTCGAC GTCACCGCCA AGGTCGGGCC GCGGACCATC GACCTGCGCG CCACCGGCCA GGTGGTGAAG TTCGACGGCT TCCTGACCCT CTACCAGGAG GGCAAGGACG ACGAGGAGGA CGAGGAGAGC CGCCGCCTGC CGCCCATGAA GGCCGGCGAC CCCCTCACCC GCGAGCGCAT CAGCGCGACC CAGCACTTCA CCGAGCCGCC GCCGCGCTAC TCCGAGGCGA GCCTCGTGAA GCGCATGGAG GAGCTCGGCA TCGGCCGGCC CTCGACCTAC GCCGCGGTGC TCCAGACCTT GCGGGACCGC GAGTACGTCA AGATCGAGAA GAAGCGGCTG CAGCCGGAGG ACAAGGGGCG GCTCGTCACG GGCTTCCTGG AGAGCTTCTT CCGGCGCTAC GTCGAGTACG ACTTCACCGC CGGCCTCGAG GAGCAGCTCG ACCGGGTCTC CAACGCCGAG ATCGACTGGC GGGCGGTGCT GCGCGACTTC TGGCGCGACT TCTCCGCGGC GATCGGCGAG ACCAAGGAGC TGCGCGTCGC CGACGTGCTG GAGGCGCTGA ACGGCCTTCT CGGGCCGCAC ATCTTCCCCG ACAAGGGCGA CGGCTCGAAC CCGCGCACCT GCCCGACCTG CGGCTCGGGC CAGCTGTCGC TGAAGCTCGG CAAGTTCGGC GCCTTCATCG GCTGCTCGAA CTACCCGGAG TGCAAGTACA CCCGCCAGCT CTCGGCCACG GGCATCGACG GCGACGGGGA CGGCTCCTCG GCCGAGGGCG GCCAGCCGGG CGTGCGCGTG CTGGGCGACG ATCCCGCGAC CGGCCTGCCG GTGACGCTCC GCGACGGCCG CTTCGGGCCG TTCCTCCAGC TCGGCGAGGC CTCCACCGAG AAGGGCGCGG AGAAGCCGAA GCGCTCGTCG CTGCCGAAGG GGCTGAGCCC CTCGGACGTG GATCTGAACA AGGCGCTGGC CCTGCTCGCG CTGCCCCGCG AGGTGGCGCG CCACCCCGAG ACCGGCGAGC CGATCCTGGC CAATCTCGGC CGGTTCGGGC CCTACGTGCA GCACGGGAAG ACCTACGCCA ATCTCGGCAA GGACGACGAC GTGCTGGAGA TCGGGGCCAA CCGCGCCATC GACCTGATCG TCGCCAAGGA GCAGGGCGGC GGCCGCGGCC GCCTGGCCGC CGATCCGGGC CGGCCGCTCG GCAAGGACGA GGCTAGCGGC CGAGACCTCG TGGTCAAGGC CGGCAAGTAC GGGCCCTACG TCACCGACGG CGAGGTCAAC GCCACGCTGC CGAAGACGAT GAGCGCCGAG GCGCTGACGC TGGACGAGGC GATCGCCCTG GTGAACGCCA AGCGCGCCGC GGGCGGCGGC AAGCCGGCGA AGCGGGGGGC GGCCCGGAAG AGTTCGGCGC GCGCCGCGAG CGGCGACAAG CCGGCGGCGA AGAAGACCGC CACGAAGAAG CCGGCGGCCA AGAAGGCGGC GACCAAGAAA TCGAGCTCGG GCTGA
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Protein sequence | MKVVVVESPA KAKTINKYLG RDYEVIASFG HIRDLPPKDG SVDPEQDFRM VWELADRGAS RVSEIAKAVK GADKLILATD PDREGEAISW HVLEALTARK ALKGIPVERV TFNAITKASV EQAMRKPREI DQALVDAYLA RRALDYLVGF NLSPVLWRKL PGARSAGRVQ SVALRLVVER EMEIERFKPR EYWTLIATLT TADGATFEAR LVGADGKRIQ RLDVGTGEEA AAFRRDLELA TFQVASVEAK PAKRHPQPPF TTSTLQQEAS RKLGMAPAQT MRVAQRLYEG VDIGGETVGI ITYMRTDGVD MAPEAIQDAR RVIGKEFGDR YVPDVPRKYS VKAKNAQEAH EAVRPTDMGR LPKTVARHLE PEQARLYELI WTRTMASQME SAELERTTVD VTAKVGPRTI DLRATGQVVK FDGFLTLYQE GKDDEEDEES RRLPPMKAGD PLTRERISAT QHFTEPPPRY SEASLVKRME ELGIGRPSTY AAVLQTLRDR EYVKIEKKRL QPEDKGRLVT GFLESFFRRY VEYDFTAGLE EQLDRVSNAE IDWRAVLRDF WRDFSAAIGE TKELRVADVL EALNGLLGPH IFPDKGDGSN PRTCPTCGSG QLSLKLGKFG AFIGCSNYPE CKYTRQLSAT GIDGDGDGSS AEGGQPGVRV LGDDPATGLP VTLRDGRFGP FLQLGEASTE KGAEKPKRSS LPKGLSPSDV DLNKALALLA LPREVARHPE TGEPILANLG RFGPYVQHGK TYANLGKDDD VLEIGANRAI DLIVAKEQGG GRGRLAADPG RPLGKDEASG RDLVVKAGKY GPYVTDGEVN ATLPKTMSAE ALTLDEAIAL VNAKRAAGGG KPAKRGAARK SSARAASGDK PAAKKTATKK PAAKKAATKK SSSG
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