Gene Mrad2831_0955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_0955 
Symbol 
ID6136972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp1011923 
End bp1012672 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content68% 
IMG OID641626665 
Productpyrimidine 5'-nucleotidase 
Protein accessionYP_001753648 
Protein GI170747388 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.559689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.38574 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACCACC CCGACAAGGC CCAGTTCACC ACGCCGGCGG CGCGCGGCTT CGCCGATGTC 
GACACCTGGG TGTTCGATCT CGACAACACC CTCTACCCGA GCGACGCCGC GGTCTGGCCG
AAGGTCGACG AGCGCATCAC CCTGTACGTG ATGCAGCTCT ACGGGCTCGA CGGCATCTCG
GCCCGCGCCC TGCAGAAGTA CTTCTATCAC CGCTACGGCA CGACGCTGTC GGCGCTGATG
GTCGAGTCGC GGATCGATCC GCACGACTTC CTCGACTTCG CCCACGACAT CGACCACTCG
TCGATCAAGC TCGACAAGAG CCTCGGCGAC GCGATCGAGC GGCTGCCCGG GCGCAAGCTG
ATCCTGACCA ACGGGTCGCG CCGCCACGCC GAGAACGTCG CCGGCAAGCT CGGCATCCTC
GACCACTTCG AGGACGTGTT CGACATCGCC GCCGCCGACT TCGTCCCGAA GCCGGAGCGC
ACGACCTACG AGCGGTTCCT GGAGAAGCAC GCCGTCGAGC CGACCCGGGC CGCCCTGTTC
GAGGACATCG CCCGCAACCT CGCGGTGCCG CACGACCTCG GCATGGCGAC CGTGCTGGTG
GTGCCGAAGG TCACCGATCC CTATCGCGAG GCCTTCGAGC AGGAGGCGGT GCGCGAGCCG
CATATCGACC ACATCACGGA CGATCTCGCC GCCTTCCTCT CCGCCTGCGT GCTGCCCGAA
GCGCAGTCGG GATCCGAGGA GCGCCGCTGA
 
Protein sequence
MHHPDKAQFT TPAARGFADV DTWVFDLDNT LYPSDAAVWP KVDERITLYV MQLYGLDGIS 
ARALQKYFYH RYGTTLSALM VESRIDPHDF LDFAHDIDHS SIKLDKSLGD AIERLPGRKL
ILTNGSRRHA ENVAGKLGIL DHFEDVFDIA AADFVPKPER TTYERFLEKH AVEPTRAALF
EDIARNLAVP HDLGMATVLV VPKVTDPYRE AFEQEAVREP HIDHITDDLA AFLSACVLPE
AQSGSEERR