Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_0955 |
Symbol | |
ID | 6136972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | + |
Start bp | 1011923 |
End bp | 1012672 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641626665 |
Product | pyrimidine 5'-nucleotidase |
Protein accession | YP_001753648 |
Protein GI | 170747388 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01993] pyrimidine 5'-nucleotidase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.559689 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.38574 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCACCACC CCGACAAGGC CCAGTTCACC ACGCCGGCGG CGCGCGGCTT CGCCGATGTC GACACCTGGG TGTTCGATCT CGACAACACC CTCTACCCGA GCGACGCCGC GGTCTGGCCG AAGGTCGACG AGCGCATCAC CCTGTACGTG ATGCAGCTCT ACGGGCTCGA CGGCATCTCG GCCCGCGCCC TGCAGAAGTA CTTCTATCAC CGCTACGGCA CGACGCTGTC GGCGCTGATG GTCGAGTCGC GGATCGATCC GCACGACTTC CTCGACTTCG CCCACGACAT CGACCACTCG TCGATCAAGC TCGACAAGAG CCTCGGCGAC GCGATCGAGC GGCTGCCCGG GCGCAAGCTG ATCCTGACCA ACGGGTCGCG CCGCCACGCC GAGAACGTCG CCGGCAAGCT CGGCATCCTC GACCACTTCG AGGACGTGTT CGACATCGCC GCCGCCGACT TCGTCCCGAA GCCGGAGCGC ACGACCTACG AGCGGTTCCT GGAGAAGCAC GCCGTCGAGC CGACCCGGGC CGCCCTGTTC GAGGACATCG CCCGCAACCT CGCGGTGCCG CACGACCTCG GCATGGCGAC CGTGCTGGTG GTGCCGAAGG TCACCGATCC CTATCGCGAG GCCTTCGAGC AGGAGGCGGT GCGCGAGCCG CATATCGACC ACATCACGGA CGATCTCGCC GCCTTCCTCT CCGCCTGCGT GCTGCCCGAA GCGCAGTCGG GATCCGAGGA GCGCCGCTGA
|
Protein sequence | MHHPDKAQFT TPAARGFADV DTWVFDLDNT LYPSDAAVWP KVDERITLYV MQLYGLDGIS ARALQKYFYH RYGTTLSALM VESRIDPHDF LDFAHDIDHS SIKLDKSLGD AIERLPGRKL ILTNGSRRHA ENVAGKLGIL DHFEDVFDIA AADFVPKPER TTYERFLEKH AVEPTRAALF EDIARNLAVP HDLGMATVLV VPKVTDPYRE AFEQEAVREP HIDHITDDLA AFLSACVLPE AQSGSEERR
|
| |