Gene Mrad2831_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_0080 
Symbol 
ID6136380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp86664 
End bp87935 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content70% 
IMG OID641625802 
Productmajor facilitator transporter 
Protein accessionYP_001752790 
Protein GI170746530 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00710] drug resistance transporter, Bcr/CflA subfamily 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCATCG CGATTCGGCC CGTCCCGCCG GTCCAGGACG TCCGCGCCCC GCGACCCTGG 
TCGGGGCCGG GCTTCGCCGA GTTCGTCGCC ATCATCGCCC TGATGATGGC GGTGACGGCG
ATCTCCATCG ACAACCTGCT GCCCGCGTTC CCGGCCATCG AGGCGCGCTT CGCCGTGCCC
GATCCCAACC GGCTGCAGCT CCTCGTCTAC GTCTACATGA TCGGCTTCGG CTTCGCGCAG
ATCGTCTACG GACCGGTCTC CGACGCCCTC GGGCGCCGGC CGGTGCTGCT GGCGAGCCTC
GCCATCTACG TGGTCGGCTG CGGCCTCGCC ATGGTGGCGC CGAGCTTCGG CTGGCTGCTC
GCCGCGCGGA TCATCCAGGG CATCGGCGCC GCCGGCGGGC GGGTGCTGTC GGTGGCGATC
GTGCGCGACC GGTTCGCCGG CCGCGAGATG GCGAGCGTGA TGTCGCTCAC CATGATGGTG
TTCCTGATCG TCCCGATGAT CGCGCCGGCG ATCGGCGGCA TGATGCTGGC GCTGGGCTCG
TGGGTCTACG TCTTCGTCTC GATGCTGGTC CTCGCCTTCT GGCTGACACT CTGGTTCTCC
CTGCGGATGC CCGAGACCCT GCACCCGGAG TACCGTCGGC CGCTCTCGCC GGCCGCGACC
TGGGAGGCGA TCCGGCTGAC GCTGAAGACC CGCGTTGCCG TCGGCTACGC CACCGCGCTC
GGGCTGATGA CCGGCTGCAT CATGGGCTAC GTCGGCTCGG CCCAGCAGGT CTTCGATACC
GGCCTGTACC ACCTCGGGCC GCTCTTCCCG CTGGCCTTCG GGCTCGTGGC CGGCGCCATG
GGCGCGGCGA CGCTGATCAA CGCCCGCGTG GTCAGGCGGC TCGGGATGCG GGCGATGTCG
CACAGCGGCG TCATCGCGTT CACGCTGGTC GGCTTGGTGC AGGTCGGCGT CGGCCTCGCC
TATCGCGGCC ACCCGCCGCT GGCGCTGTTC CTCTCGATCC TCGCGGTGAA CCAGTTCCTG
ATCAGCTTCG CGATGCCGAA TTTCAACGCC CTCGCGCTGG AGCCGCTCGG CGCCATCGCC
GGCACGGCCT CGTCGTTCCT GGGTTTCTAC ACGACGATCC TGGGCGCGCT CTGCGGCTTC
CTGATCGGCC AGTCCTTCGA CGGCACGGTG CTTCCCGTGG CGATCGGCTA CGCCAGTCTG
GGCGCCCTGG CGCTCCTCGT GGTCGCGTGG ACCGAGCGCG GCCGACTCTT CCGCGGCGGC
GTCGGCGGTT GA
 
Protein sequence
MTIAIRPVPP VQDVRAPRPW SGPGFAEFVA IIALMMAVTA ISIDNLLPAF PAIEARFAVP 
DPNRLQLLVY VYMIGFGFAQ IVYGPVSDAL GRRPVLLASL AIYVVGCGLA MVAPSFGWLL
AARIIQGIGA AGGRVLSVAI VRDRFAGREM ASVMSLTMMV FLIVPMIAPA IGGMMLALGS
WVYVFVSMLV LAFWLTLWFS LRMPETLHPE YRRPLSPAAT WEAIRLTLKT RVAVGYATAL
GLMTGCIMGY VGSAQQVFDT GLYHLGPLFP LAFGLVAGAM GAATLINARV VRRLGMRAMS
HSGVIAFTLV GLVQVGVGLA YRGHPPLALF LSILAVNQFL ISFAMPNFNA LALEPLGAIA
GTASSFLGFY TTILGALCGF LIGQSFDGTV LPVAIGYASL GALALLVVAW TERGRLFRGG
VGG