| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_0069 |
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| Symbol | |
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| ID | 6136369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium radiotolerans JCM 2831 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010505 |
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| Strand | - |
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| Start bp | 72052 |
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| End bp | 73857 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641625791 |
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| Product | RNA-binding S4 domain-containing protein |
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| Protein accession | YP_001752779 |
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| Protein GI | 170746519 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.394363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACT TGCCGAACGA CGATAAGCCG GAGGGGACCG CCCGTCCGGC CCCCGAGTCA
GCGCGCACCG AGGGTTGGGC GCCGCCGACC GATGCGGGCC GCGCCGACAC CGAGGGCGAC
GGGTCCGCCA AGTCCGCCGC GAAGAAGGCC GCCCGAAAGG CCAAGCCGCA GCCTCCTCAG
CAGACGGTCC CTGCGCCGGA GCCCGAACCC GCCTCGTCCG CCGACACCGA GGGCCTGATC
GAGACGCCGC CCGGCGAGCG CATCGCGAAG GCGATGGCTC GGGCTGGCAT CGCCTCGCGG
CGCGACGCCG AGACGATGAT TGTGGCCGGA CGCGTGAGCG TCAACGGCGA GACGCTGACG
TCCCCCGCCC GCAACGTCAC CGAGAACGAC CGCATCCTGA TCGATGGCGA GCCGATGCCG
TCGCGGGAGC GCAGCCGCCT GTGGATCTTC CACAAGCCGC GGGGCGTGGT GACGACCGCC
CGGGATCCGG AGGGCCGGCA GACGGTGTTC GACGTGCTCC CGGAGGATCT ACCCCGGGTC
GTGGCTGTCG GACGGCTCGA CATCAACACC GAGGGGCTGC TGCTCCTCAC CAACGATGGT
GGGCTCGCCA AGGTGATCGC GCATCCTGAC ACGGGCTGGC TGCGCCGCTA CCGGGTCCGC
GCCCACGGCG ACACCGATCA GGCCCAACTC GACCGGCTGG CCAAGGGCGT CACCATCGAC
GGGATGGAGT ACGGCCCCGT CGAGGCGACG CTCGACCGGG TGCAGGGCGA CAACGTCTGG
CTGACACTCG GCCTGCGCGA GGGCAAGAAC CGCGAAGTCA AGCGCATCCT GGAGCATCTC
GGGCTCTCGG TGAACCGGCT GATCCGGCTC TCCTTCGGGC CGTTCCAGCT CGGCGACCTA
GAAGTCGGTC TGGTCGAGGA GGTGCGGACC CGCGTGCTCA AGGATCAGCT CGGCAAGAGC
CTCGCCGAGC AGGCCGGCGT GGATTTCGAC AGCCCGGTCC GCGAGCCGAT CGCGCCGTTC
GGCGGCACCC GCCCGGCGGA CCGCGATGCC AAGTCCGCGC AGCCGGCGCC GGCCCGGCGC
AACGCCGCGC GTCCCGCGCC GGCGCCGCGC GTCTCGACCG GAGGCGCCGG TCCCGGACCG
CGTAGCTCCA CGTGGCGCGA TGAGGACGCG GCGAAGCCCC GGGGCACGCG CGTGCCCCGG
CGCGGCGCGG ATCCCCGGAC CGCACAGGCG GCCGCGGCGG AACGCGGCCG CGAGCGCGTC
GGCTCGATCC GCGCCGGTGA GCGCCGGGTC GTCGTCGAGC GGCTGTCCGC CACACCGGCG
GAGCCGGCCC CCGTCGCCAA GCCGAAGCGC CGCTTCGCCG ACCGCGGAGC GCCGGAGCGA
CAGGAACGCC CCGCCGGTCC GCGCAACGAG CGCCGCGGCG ACGAGCGCCC GCGTCGCGAG
ACCGCGCGGA GCGACGCACC GCGTGACGAG CGGCGATTCG ACGAGCGCGG CGGCAAGTCC
GGAGGACGGC GCGAACGGAC GTTCGAGGCC GGGCCGACCG AGGGGACGTC GCGCAAGCCG
GGCGGGTTCC GCGGCTCGAA GCCGGCCGGC GCTGGGGGCA AGCCCGCGTT CGGCGGCCCG
AAGACGGGGG CGCCGCGTCC CGGCGGAAGT CGCCCCGGTG GCAAGCCCGG CGGATTCACC
GGTAAGGCGG GCGGCCAGGG CACGCGCAGC GGCCCGGGCG GCGGCCCGAG CGCGGGCGGC
CGTCCCGGTG CGCCGCGCGG CGGCGCCCGG CCCGGCGGCG GCAGGCCGCC CCGCGGGACG
CGATGA
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| Protein sequence | MSDLPNDDKP EGTARPAPES ARTEGWAPPT DAGRADTEGD GSAKSAAKKA ARKAKPQPPQ
QTVPAPEPEP ASSADTEGLI ETPPGERIAK AMARAGIASR RDAETMIVAG RVSVNGETLT
SPARNVTEND RILIDGEPMP SRERSRLWIF HKPRGVVTTA RDPEGRQTVF DVLPEDLPRV
VAVGRLDINT EGLLLLTNDG GLAKVIAHPD TGWLRRYRVR AHGDTDQAQL DRLAKGVTID
GMEYGPVEAT LDRVQGDNVW LTLGLREGKN REVKRILEHL GLSVNRLIRL SFGPFQLGDL
EVGLVEEVRT RVLKDQLGKS LAEQAGVDFD SPVREPIAPF GGTRPADRDA KSAQPAPARR
NAARPAPAPR VSTGGAGPGP RSSTWRDEDA AKPRGTRVPR RGADPRTAQA AAAERGRERV
GSIRAGERRV VVERLSATPA EPAPVAKPKR RFADRGAPER QERPAGPRNE RRGDERPRRE
TARSDAPRDE RRFDERGGKS GGRRERTFEA GPTEGTSRKP GGFRGSKPAG AGGKPAFGGP
KTGAPRPGGS RPGGKPGGFT GKAGGQGTRS GPGGGPSAGG RPGAPRGGAR PGGGRPPRGT
R
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