| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_0011 |
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| Symbol | |
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| ID | 6136309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium radiotolerans JCM 2831 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010505 |
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| Strand | - |
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| Start bp | 11528 |
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| End bp | 13960 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641625731 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_001752721 |
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| Protein GI | 170746461 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.927045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCAA CGAAATCCGA ACCGCTCGAT CTCGACCTCA CCGCCGAGGA AGCGCGCGCC
GAGTACGCGC GCCTGTCGGA CGCGATCCTG GAGGCCGATC GCCTCTACTA TCAGGAAGAC
GCGCCCGAGA TATCGGACGC CGAGTACGAC CGGCTGCGCC GCCGCCTGGA AGACATCGAG
GCCCGCTTCC CCGATCTCGC CGGTACCGGC GCCGCCAGCA CGTCGGTCGG CGCGAAGCCT
TCGGAGAAGT TCGCCAAGGT GCGGCACGCG GTGCCCATGC TCTCGCTGGG CAACGCCTTC
GACGACGCGG AGGTGGCCGA GTTCGTCGCG CGCGTGCGCC GCTTCCTCGG CTGGTCGGAC
GACACTCCCC TCGCCTTCAC GGCCGAGCCG AAGATCGACG GCCTGTCCCT ATCGCTCCGT
TACGTGAACG GCCGGCTCGA CACCGCCGCC ACCCGCGGCG ACGGCGAGGT CGGCGAGAAC
GTCACGGCCA ATGCCCGCAC GGTGCAGGAC ATCCCGGCGG TGCTCGCGGG GGCCGGCTGG
CCGGAGATCT GCGAGGTGCG CGGGGAGGTC TACCTGTCCC ACGCCGACTT CGCCGCCATC
AACGCCCGGC AGGAAGCGGC CGGCAAGCCT CTCTTCGCCA ACCCGCGCAA CGCCGCCGCC
GGCAGCCTGC GCCAGCTCGA TCCCGCGATC ACCGCGTCCC GGCCGCTGCG ATTCTTCGCC
TATGCCTGGG GCGAGCTGTC GGCGCCGATC GCCGAGACCC AGACCGGCGT GCTGGAGCAG
TTCGCGACCT GGGGCCTGCC GGTGAACCCG CGCACCGAGA CCTTCACCGA CACGGCGGCG
ATGCTCGCCC ATTACCGCCG CATCGAGGCG GACCGGGCCG GGCTCGGCTA CGACATCGAC
GGCGTCGTCT ACAAGGTCGA CGACCTCGCG CTCCAGAAGC GGCTGGGCTT CGTCTCGCGC
TCGCCCCGCT GGGCGCTCGC CCACAAATTC GCCGCCCAGG AAGCCACGAC GGTCGTCGAG
GACATCGTCA TCAATGTCGG CCGCACCGGC TCGCTGAACC CGCTGGCCAA GCTCCGTCCC
GTGACGGTGG GCGGCGTCGT CGTGTCGAAC GCCACCCTGC ACAACGAGGG CTACGTGAAG
GGCGTCGGCG CCGACGGCGA GCCGATCCGC GACGGCCGCG ACATCCGCGT CGGCGACACG
GTGACGGTGG TCCGGGCCGG CGACGTTATC CCCAAGGTCA TGGACGTCGA CCTCACGAAG
CGCCCGGCCG ACTCGCGGCC CTACGCGTTC CCGGAGTCAT GCCCGGCCTG CGGCAGCCGA
GCCGTCCGCG CCATCAACCC GCGCACCGGC CGGCCCGACG CGGTGCGCCG CTGCACCGGC
GGCCTGATCT GCCCGGCGCA GGGCGTCGAG CGGATGAAGC ACTTCGTGTC GCGCAACGGC
TTCGACATCG AGGGCTTCGG CGAGACGTAT ATCGAGGTCC TGTTCGAGGC CGGACTGGTG
CGCCAGCCCG CCGACCTGTT CCGCCTGGAC TTCGAGGAAC TCAAGGCCGC GATCGTGGCG
CGGCGCGAGG CGCTGTCGGC CGAGCGGCGC GCGGAATCGG GGACGGCCGA GCCGCCCAAG
AAGGCCGCCA AGAAGAAGGG CGACGAGGAC GACAAGGCGA TCAAGAACCT GCTCGCCGCC
GTCGAGGCAC GGCGCGCGGT GCCGATGAAC CGCCTGCTCT TCGCCCTCGG TATCCCGCAG
ATCGGCGAGG CGACCGCCAA GGCGCTGGCG AAGCGCTTCG CCGACATGCC GACGCTGATC
GCGGCGATCC GCGAGGCCGC GGCGGCGCAG CCGGGTCCCG ACTGGGTCGA GCTCACCGCA
GTGCCGCGCG TCGGGGGCAC CACCCGGGAC CGGCTCCTCG ATCTCGGCTT CCCGGAGGAC
GACGCGGCGC CGGCCAAGGA GCGGGCGCGC CTGAGCGCCG TCCAGCGCGA GAACCTCCTC
GCCCATTACG GCGACGTCGA CGCGGTGCGC GCCGCGATCG CGCAGGCTGC GGCGCAGCGT
CCCGGCGATG CCTACCGGGT CTTCGCCGAC GACGGCGAGA TCGGCCCGGT GGCGACCGAT
GCCCTGCTCC TGTTCTTCTC CGAGCCGCAC AACGCCGACG CCGTCACCGC GCTGCTCGAC
GCGGTCGCGG TGCAGCCGAT GGAGCGGGCC GCCGCGGCCT CCACCTTCGC GGGGAAGACC
GTGGTCTTCA CCGGCGCCCT GGAGAAGATG ACCCGCAACG AGGCCAAGGC GGTGGCCGAG
CGGCTGGGCG CGAAGGTCTC GGGCTCGGTC TCGGCCAAGA CCGACCTGGT CGTCGCCGGC
CCGGGAGCGG GCTCGAAGCT GAAGGACGCC CAGAAGCACG GTGTCCGGGT CGTCTCGGAG
GACGATTGGC TGGCGATGGT GGCGCAGGGT TGA
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| Protein sequence | MAATKSEPLD LDLTAEEARA EYARLSDAIL EADRLYYQED APEISDAEYD RLRRRLEDIE
ARFPDLAGTG AASTSVGAKP SEKFAKVRHA VPMLSLGNAF DDAEVAEFVA RVRRFLGWSD
DTPLAFTAEP KIDGLSLSLR YVNGRLDTAA TRGDGEVGEN VTANARTVQD IPAVLAGAGW
PEICEVRGEV YLSHADFAAI NARQEAAGKP LFANPRNAAA GSLRQLDPAI TASRPLRFFA
YAWGELSAPI AETQTGVLEQ FATWGLPVNP RTETFTDTAA MLAHYRRIEA DRAGLGYDID
GVVYKVDDLA LQKRLGFVSR SPRWALAHKF AAQEATTVVE DIVINVGRTG SLNPLAKLRP
VTVGGVVVSN ATLHNEGYVK GVGADGEPIR DGRDIRVGDT VTVVRAGDVI PKVMDVDLTK
RPADSRPYAF PESCPACGSR AVRAINPRTG RPDAVRRCTG GLICPAQGVE RMKHFVSRNG
FDIEGFGETY IEVLFEAGLV RQPADLFRLD FEELKAAIVA RREALSAERR AESGTAEPPK
KAAKKKGDED DKAIKNLLAA VEARRAVPMN RLLFALGIPQ IGEATAKALA KRFADMPTLI
AAIREAAAAQ PGPDWVELTA VPRVGGTTRD RLLDLGFPED DAAPAKERAR LSAVQRENLL
AHYGDVDAVR AAIAQAAAQR PGDAYRVFAD DGEIGPVATD ALLLFFSEPH NADAVTALLD
AVAVQPMERA AAASTFAGKT VVFTGALEKM TRNEAKAVAE RLGAKVSGSV SAKTDLVVAG
PGAGSKLKDA QKHGVRVVSE DDWLAMVAQG
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