Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_0005 |
Symbol | |
ID | 6136303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | - |
Start bp | 4411 |
End bp | 5190 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641625725 |
Product | diguanylate phosphodiesterase |
Protein accession | YP_001752715 |
Protein GI | 170746455 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.162907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAAGG ATTCCGGCTG CCGCGCCTGT CGCGCCGGCA CCAAGCTCGA CTTCGACTTC ACGATGGCGT TTCAGCCGAT CCTCGACCTC GCGGACGGCA GCGTCTGGGC CTACGAGGCG CTGGTGCGCG GCCCGAACGG CGAGCCAGCC TACACGATCC TCGACCGGGT GACCGACGAC ACCCGCTACC AGTTCGATCA GGCCGCCCGC GTCAAGGCGA TCGAACTCGC CGGCACCCTG TTCCCCCGCG ACAGCGCCAC GCGGCTGTCG ATCAACTTCA TGCCGAACGC GGTCTACGAG CCGAATGCCT GCATCCGCGC CTCGCTCGAG GCGGCCCGGC GCATCGACTT CGCCCACCGA CGCATCATGT TCGAGTTCAC CGAGCAGGAG CGGTTTCGCG ACCTCGAGCA CGTGAAGGGC ATCGTCGCCG CCTACCGGAA GCAGGGATTC CTGACGGCGC TCGACGATTT CGGCGCCGGC TTCGCGGGCT TGAGCCTGCT CGCCAACTTC CGCCCCGACC TGATCAAGAT CGACATGGAC GTGCTGCGCG GCCTCGACAA CGACGCCGGG CGCTACGCCA TCGTCTCGGG CGTGGTCGCC ATCGCCCGCG CCCTCGACGT CACGGTGCTG GCCGAGGGCG TGGAGACCGC CGGGGAGCTC GACGCCCTGC GAAACATCGG GATCACGCTC GTGCAGGGCT ACCACTTCGC CAAGCCCCTC CTGGAGGGAC TGCCCCCGGT CGCGGGCTTC GCCCCCGTGG CTGCCGCGCG CGCAGCCTGA
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Protein sequence | MTKDSGCRAC RAGTKLDFDF TMAFQPILDL ADGSVWAYEA LVRGPNGEPA YTILDRVTDD TRYQFDQAAR VKAIELAGTL FPRDSATRLS INFMPNAVYE PNACIRASLE AARRIDFAHR RIMFEFTEQE RFRDLEHVKG IVAAYRKQGF LTALDDFGAG FAGLSLLANF RPDLIKIDMD VLRGLDNDAG RYAIVSGVVA IARALDVTVL AEGVETAGEL DALRNIGITL VQGYHFAKPL LEGLPPVAGF APVAAARAA
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