Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_5145 |
Symbol | |
ID | 6114147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 5705432 |
End bp | 5706832 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641624969 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_001751990 |
Protein GI | 170724302 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.671755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCCT ATGACGTGGT GATCATCGGC GGTGGCCCTG GCGGCTACAA CGCGGCGATT CGTGCTGGGC AACTGGGTCT GAGTGTCGCC TGTGTGGAAG GCCGCTCGAC CCTTGGCGGT ACCTGCCTGA ATGTCGGCTG CATGCCGTCC AAGGCATTGC TGCATGCCTC GGAATTGTAT GAGGCAGCCA GCGGTGACGA GTTTGCTCAC CTCGGCATCG AAGTGAAGCC AACCCTGAAT CTCGCTCAGA TGATGAAACA GAAGGACGAG AGCGTGACTG GCCTGACCAA GGGCATCGAG TACCTGTTTC GCAAGAACAA GGTCGACTGG ATCAAAGGCT GGGGCCGCCT GGATGGCGTA GGCAAGGTCA TCGTCAAAGC CGAGGACGGC AGCGAGATCT CGCTGCAGGC CAAGGACATT GTCATCGCTA CCGGCTCCGA GCCCACTCCC CTTCCAGGCG TGACTATTGA TAACCAGCGC ATCATCGATT CCACAGGCGC TTTGGCCCTT CCCGAGGTGC CCAAGCACCT GATCGTGATC GGCGCCGGCG TCATCGGCCT GGAGCTGGGT TCGGTGTGGC GTCGCCTGGG CAGCCAGGTC ACCGTCATTG AATACCTCGA CCGCATCTGC CCCGGCACAG ATGAGGAAAC CGCAAAGACC CTGCAAAAGG CCCTGGCCAA GCAAGGCATG GCCTTCAAGC TCGGCAGCAA GGTGACTCAG GCAACGGCCT CGCCCGACGG CGTCAGCCTG ACGCTGGAGC CGGCCGCCGG CGGCGCTGCA GAAACACTGC AAGCCGACTA CGTACTGGTT GCCATCGGCC GTCGTCCTTA TACCCAAGGC CTGAATCTGG AAAGTGTCGG GCTGCAGACC GATAAACGCG GCATGCTCAC CAACGAGCAT CATCGCACCT CGGTACCGGG TGTCTGGGTC ATTGGCGACG TCACCTCCGG CCCAATGCTG GCGCACAAGG CCGAAGATGA AGCGGTCGCC TGCATCGAGC GCATCGCCGG AAAACCCCAC GAAGTCAATT ACAACCTGAT CCCCGGCGTG ATCTACACCC GCCCCGAGTT GGCCAGCGTC GGCAAGACCG AAGAGCAACT CAAGGCAGAG GGCCGCGCCT ACAAAGTGGG CAAGTTCCCC TTCACCGCCA ACAGCCGCGC GAAGATCAAC CATGAGACCG AAGGCTTCGC CAAGGTCCTC GCTGATGCCA ACACCGATGA GGTACTGGGC GTGCATCTGG TCGGCCCAAG CGTCAGCGAG ATGATTGGCG AGTTCTGCGT GGCGATGGAA TTCTCGGCCT CGGCTGAAGA CATCGCCCTC ACCTGCCACC CGCACCCCAC CCGCTCCGAG GCCTTGCGCC AGGCGGCGAT GAATGTGGAT GGGATGGCGA TGCAGATCTG A
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Protein sequence | MKSYDVVIIG GGPGGYNAAI RAGQLGLSVA CVEGRSTLGG TCLNVGCMPS KALLHASELY EAASGDEFAH LGIEVKPTLN LAQMMKQKDE SVTGLTKGIE YLFRKNKVDW IKGWGRLDGV GKVIVKAEDG SEISLQAKDI VIATGSEPTP LPGVTIDNQR IIDSTGALAL PEVPKHLIVI GAGVIGLELG SVWRRLGSQV TVIEYLDRIC PGTDEETAKT LQKALAKQGM AFKLGSKVTQ ATASPDGVSL TLEPAAGGAA ETLQADYVLV AIGRRPYTQG LNLESVGLQT DKRGMLTNEH HRTSVPGVWV IGDVTSGPML AHKAEDEAVA CIERIAGKPH EVNYNLIPGV IYTRPELASV GKTEEQLKAE GRAYKVGKFP FTANSRAKIN HETEGFAKVL ADANTDEVLG VHLVGPSVSE MIGEFCVAME FSASAEDIAL TCHPHPTRSE ALRQAAMNVD GMAMQI
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