Gene PputW619_5145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_5145 
Symbol 
ID6114147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp5705432 
End bp5706832 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content62% 
IMG OID641624969 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_001751990 
Protein GI170724302 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.671755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCT ATGACGTGGT GATCATCGGC GGTGGCCCTG GCGGCTACAA CGCGGCGATT 
CGTGCTGGGC AACTGGGTCT GAGTGTCGCC TGTGTGGAAG GCCGCTCGAC CCTTGGCGGT
ACCTGCCTGA ATGTCGGCTG CATGCCGTCC AAGGCATTGC TGCATGCCTC GGAATTGTAT
GAGGCAGCCA GCGGTGACGA GTTTGCTCAC CTCGGCATCG AAGTGAAGCC AACCCTGAAT
CTCGCTCAGA TGATGAAACA GAAGGACGAG AGCGTGACTG GCCTGACCAA GGGCATCGAG
TACCTGTTTC GCAAGAACAA GGTCGACTGG ATCAAAGGCT GGGGCCGCCT GGATGGCGTA
GGCAAGGTCA TCGTCAAAGC CGAGGACGGC AGCGAGATCT CGCTGCAGGC CAAGGACATT
GTCATCGCTA CCGGCTCCGA GCCCACTCCC CTTCCAGGCG TGACTATTGA TAACCAGCGC
ATCATCGATT CCACAGGCGC TTTGGCCCTT CCCGAGGTGC CCAAGCACCT GATCGTGATC
GGCGCCGGCG TCATCGGCCT GGAGCTGGGT TCGGTGTGGC GTCGCCTGGG CAGCCAGGTC
ACCGTCATTG AATACCTCGA CCGCATCTGC CCCGGCACAG ATGAGGAAAC CGCAAAGACC
CTGCAAAAGG CCCTGGCCAA GCAAGGCATG GCCTTCAAGC TCGGCAGCAA GGTGACTCAG
GCAACGGCCT CGCCCGACGG CGTCAGCCTG ACGCTGGAGC CGGCCGCCGG CGGCGCTGCA
GAAACACTGC AAGCCGACTA CGTACTGGTT GCCATCGGCC GTCGTCCTTA TACCCAAGGC
CTGAATCTGG AAAGTGTCGG GCTGCAGACC GATAAACGCG GCATGCTCAC CAACGAGCAT
CATCGCACCT CGGTACCGGG TGTCTGGGTC ATTGGCGACG TCACCTCCGG CCCAATGCTG
GCGCACAAGG CCGAAGATGA AGCGGTCGCC TGCATCGAGC GCATCGCCGG AAAACCCCAC
GAAGTCAATT ACAACCTGAT CCCCGGCGTG ATCTACACCC GCCCCGAGTT GGCCAGCGTC
GGCAAGACCG AAGAGCAACT CAAGGCAGAG GGCCGCGCCT ACAAAGTGGG CAAGTTCCCC
TTCACCGCCA ACAGCCGCGC GAAGATCAAC CATGAGACCG AAGGCTTCGC CAAGGTCCTC
GCTGATGCCA ACACCGATGA GGTACTGGGC GTGCATCTGG TCGGCCCAAG CGTCAGCGAG
ATGATTGGCG AGTTCTGCGT GGCGATGGAA TTCTCGGCCT CGGCTGAAGA CATCGCCCTC
ACCTGCCACC CGCACCCCAC CCGCTCCGAG GCCTTGCGCC AGGCGGCGAT GAATGTGGAT
GGGATGGCGA TGCAGATCTG A
 
Protein sequence
MKSYDVVIIG GGPGGYNAAI RAGQLGLSVA CVEGRSTLGG TCLNVGCMPS KALLHASELY 
EAASGDEFAH LGIEVKPTLN LAQMMKQKDE SVTGLTKGIE YLFRKNKVDW IKGWGRLDGV
GKVIVKAEDG SEISLQAKDI VIATGSEPTP LPGVTIDNQR IIDSTGALAL PEVPKHLIVI
GAGVIGLELG SVWRRLGSQV TVIEYLDRIC PGTDEETAKT LQKALAKQGM AFKLGSKVTQ
ATASPDGVSL TLEPAAGGAA ETLQADYVLV AIGRRPYTQG LNLESVGLQT DKRGMLTNEH
HRTSVPGVWV IGDVTSGPML AHKAEDEAVA CIERIAGKPH EVNYNLIPGV IYTRPELASV
GKTEEQLKAE GRAYKVGKFP FTANSRAKIN HETEGFAKVL ADANTDEVLG VHLVGPSVSE
MIGEFCVAME FSASAEDIAL TCHPHPTRSE ALRQAAMNVD GMAMQI