| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_5130 |
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| Symbol | uvrD |
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| ID | 6114132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 5689936 |
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| End bp | 5692125 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641624954 |
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| Product | DNA-dependent helicase II |
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| Protein accession | YP_001751975 |
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| Protein GI | 170724287 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.228367 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACAG ATGACCTCTC ACTCCTGCTG AATTCCTTGA ACGATGCCCA ACGCCAGGCC
GTCGCGGCCA CGCTCGGGCG TCAGCTGGTG CTTGCTGGCG CCGGTTCCGG TAAAACCCGC
GTGCTGGTGC ATCGCATCGC CTGGCTGATC CAGGTCGAGC AGGCCTCACC GCACTCGATC
CTGTCGGTGA CCTTCACCAA CAAGGCTGCC GCCGAAATGC GCCAGCGTAT CGAGCAATTG
CTGGGCATCA ACCCGGCCGG CATGTGGGTG GGGACCTTCC ACGGTCTGGC GCATCGGTTG
TTGCGCGCCC ACTGGCAGGA AGCGCGCCTG GTACAGAATT TCCAGATCCT CGACAGTGAT
GACCAGCAGC GCCTGGTCAA GCGGGTGATC CGTGAGCTTG GTCTCGACGA GCAGCGCTGG
CCCGCGCGCC AGGCACAGTG GTTCATCAAC GGGCAGAAGG ACGAAGGCCT GCGCCCGCAG
CATATCCAGG CCAGCGGCGA CCTGTTCCTG GGGACCATGC GTAGCATCTA TGAAGCCTAC
GAACAGGCCT GCGAACGCGC GGGAGTGATC GACTTCTCCG AACTCCTGCT GCGTGCCTTG
GACCTGTGGC GCGACCACCC GGGCCTGCTC GAACACTACC AGCGGCGCTT CCGCCACCTG
CTGGTGGACG AGTTCCAGGA CACCAACGCC GTACAGTACG CCTGGCTGCG CCTGCTGGCT
GGCAAGGGCG GCGGAAGCCT GATGGCCGTA GGCGACGACG ACCAGTCGAT TTACGGCTGG
CGCGGCGCCA AGATTGAAAA TATTCACCAG TACACGGCTG ACTTCCCTGA CGCCGAGATG
ATCCGCCTGG AGCAGAACTA CCGCTCCACC GGCGGCATCC TCAAAGCCGC CAACGCGCTG
ATCGCAAACA ACAGCGGGCG CTTGGGCAAA GAGCTTTGGA CCGATCTGGG CGAGGGCGAG
CCTTTGACCC TTTATGCGGC TTACAACGAG CATGACGAAG CGCGCTACGT GGTCGAGACC
ATTGAAAGCC TGATCAAGCA AGGCAATTCG CGCAGCGACA TCGCCATCCT GTATCGCTCC
AACGCCCAGT CGCGGGTGCT GGAAGAAGCC CTGCTGCGCG AGCGCATCCC CTACCGCATC
TATGGTGGCC AGCGCTTCTT CGAACGCGCC GAGATCAAGA ACGCCATGGC TTACCTGCGC
TTGATAGAAG GCCGTGGCAA CGACGCCGCC CTCGAACGGG TCATCAATGT GCCACCGCGT
GGCATTGGCG AGAAAACTGT CGAGGCCATT CGTGAACATG CCCGCCACAG TCAACTGTCG
ATGTGGGGGG CCATGTGCCA ACTGCTCGCC GCCAAGGCAC TCAAAGGCCG GGCAGCCAGT
GCGCTGGGCG CTTTCATCGA GCTGATCGAG AGCCTGGCTG GCAAAGTCGC GGACATGCCC
CTGCATACCA TGACGCAGAC AGTCGTCGAG CAGTCCGGAC TGATCATCTA TCACCAGGAA
GAAAAGGGTG AAAAGGGTCA GGCACGGGTA GAAAACCTTG AGGAACTGGT CAGCGCAGCA
CGAAACTTCG AAACCACTGA CGATGACGCC GACCTTTCGC CGCTGTCGGC CTTCCTCGGT
CATGCTTCGC TTGAAGCCGG CGAGGCCCAG GCTGACGAGC ACGAAGACAG CATTCAGCTG
ATGACGTTGC ATAGCGCCAA GGGCCTGGAA TTCCCCTACG TCTTCCTGGT GGGCATGGAA
GAAGGCCTGT TCCCGCACAA GATGAGCCTG GAAGAGCCAG GCCGCCTGGA AGAAGAGCGC
CGACTGGCGT ACGTGGGCAT TACCCGTGCC ATGCGCCAGC TATTCATGAC CTATGCCGAA
ACGCGTCGCC TGTATGGCAG TGAAACCTAC AATAAGGTGT CACGATTCGT ACGGGAAATT
CCGCCAGGCC TGGTTCAGGA AGTGCGTCTT TCGAACAGCG TCAGCCGCCC GTTCGGCGGC
GCCAAGAGCA CCAGCGCCAG CAGCCTGTTC GCCAATGCCA ACATTCCCCA GACCGCTTTC
AATCTGGGCC AGCGGGTACA GCATTCGGTA TTCGGTGAAG GTGTGATCCT CAACTTCGAG
GGTTCCGGCG CACAGGCGCG CGTGCAGGTG AACTTTGCCG AAGGCAGCAA GTGGCTGATG
CTGGGCTATG CCAAGCTCGA AGCTATCTGA
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| Protein sequence | MHTDDLSLLL NSLNDAQRQA VAATLGRQLV LAGAGSGKTR VLVHRIAWLI QVEQASPHSI
LSVTFTNKAA AEMRQRIEQL LGINPAGMWV GTFHGLAHRL LRAHWQEARL VQNFQILDSD
DQQRLVKRVI RELGLDEQRW PARQAQWFIN GQKDEGLRPQ HIQASGDLFL GTMRSIYEAY
EQACERAGVI DFSELLLRAL DLWRDHPGLL EHYQRRFRHL LVDEFQDTNA VQYAWLRLLA
GKGGGSLMAV GDDDQSIYGW RGAKIENIHQ YTADFPDAEM IRLEQNYRST GGILKAANAL
IANNSGRLGK ELWTDLGEGE PLTLYAAYNE HDEARYVVET IESLIKQGNS RSDIAILYRS
NAQSRVLEEA LLRERIPYRI YGGQRFFERA EIKNAMAYLR LIEGRGNDAA LERVINVPPR
GIGEKTVEAI REHARHSQLS MWGAMCQLLA AKALKGRAAS ALGAFIELIE SLAGKVADMP
LHTMTQTVVE QSGLIIYHQE EKGEKGQARV ENLEELVSAA RNFETTDDDA DLSPLSAFLG
HASLEAGEAQ ADEHEDSIQL MTLHSAKGLE FPYVFLVGME EGLFPHKMSL EEPGRLEEER
RLAYVGITRA MRQLFMTYAE TRRLYGSETY NKVSRFVREI PPGLVQEVRL SNSVSRPFGG
AKSTSASSLF ANANIPQTAF NLGQRVQHSV FGEGVILNFE GSGAQARVQV NFAEGSKWLM
LGYAKLEAI
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