| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_5117 |
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| Symbol | |
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| ID | 6114119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5676048 |
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| End bp | 5677574 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641624941 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001751962 |
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| Protein GI | 170724274 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000208159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0731219 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGC GCCCTTTGGT ATTGCCATTC GATCCCGCCG GGATCGTCCT CGACCAGCGC
CGAGGGCTGA GTCAACAGCT CTATCAAGCG CTGCGCGCTC GCGTGCTGGA TGGGCGCTTG
AGCAGCGGCA CGCGCCTGCC GGCGACACGA GACTTGGCGG GTATGCTCGG GCTCTCGCGC
AACAGCGTGG TGCGTGCCTA TGACCAACTG TATGCCGAAG GCTACATAGA AAGCCGGGTA
GGAGATGGCA CTTATGTTTG CCATCTGCCG AAACTATCCA CACAACTGTC CACAGGGTTA
TCCCATGGCT TATCAACAGG GTTATCCACA AAATGCTCAG AAAGCACTGA TGATTTATCC
AGATGTGGGC GTTCCAGTGA GCGTTTGGAG CGTCTGAAAA GTAACCATCT GCCATCCCCA
AAAGTTGGCC CGCCACGGGC ATTTCGGGTA GGTGTTCCAG CCTTCGATCT GTTCCCCTTT
GAGGTCTGGG CCAAGCTGCA AGCGGGCTTC TGGCGAAATC CCGATCCAGC GCACCTTGGC
TATGGCGACC CGGCGGGCGA GCCGTTACTG CGTGAATTGA TCGCTGCGTA TCTACGTCGG
TCGAGGGGTA TGTCGTGCAC GGCTGGACAA ATTGTGATCA CCAGTGGTGC GCAGGAGGCA
ATTAGCCTTT GTGCACAGTT GTTGTTGCAG CCCGGGGATG AGGTGGCTGT GGAAAATCCC
GGGTATCGTG CTGCCGGGCA CGCGTTTGCA GTAGCGGGCG GGCGGGTGAG GGGTGTGCCG
GTAGATGAAG AAGGCCTCGA CTGCACCAGG CTTGCACTCG CTGGCGACTG TCGCTTGGTT
TACGTCACCC CAGCGCATCA GTACCCGACT GGGGTGACCA TGAGCCTGGC CCGGCGCTTG
GCGTTGCTGG CCTGGGCCGA GCGCCAGGAT GGCTGGATCA TCGAAGATGA CTATGACGGT
GAGTACCGTT ACAACGGAGC ACCGCTGGCG CCGTTGGCGG CTTTGGACCG GCAAGGGCGG
GTGCTGTACG TCGGTACCTT TGGCAAGATC GCTTTCCCAG CGCTGCGCCT TGGCTACTTG
GTACTGCCGG CGCGGTTGGT GCAGGCTTTC AGCCAGGGCA GGGCGCTGGC AGTGCGGCAT
TCCGAGGTGG GAACCCAGTG CGTGATGGCC GAGTTCATGG CCCAGGGGCA TTTTCAGAGG
CATATACGCC GCATGCGCCG TGCGGCGCTG AGCCGGCGTA ATGTGCTGAA GGCCGGGTGG
CCTGTGGATG TTTCTGGGCT GGCGGGGATG CCGGATGTGG CAGCTGGGCT GCATGTGAAA
GTCGATGTGG ATAACTTTGC ACGCGAGCAG GACTTGATAG CCAAGGCCGA AGCGGTGGGT
GTGGAGGTGA ATCCGCTTAG CAGTTACTGG CTTGAGGACA GCGAAGTGCC TGTGGATAAA
CGCGCGGGGT TGGTGCTTGG GTTTGCGGCA GTGCCAGAGG GAGAGATTGC TGAGGCGTTG
ATGCGCTTGC GCAAGGCCTG GAGGTAG
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| Protein sequence | MSERPLVLPF DPAGIVLDQR RGLSQQLYQA LRARVLDGRL SSGTRLPATR DLAGMLGLSR
NSVVRAYDQL YAEGYIESRV GDGTYVCHLP KLSTQLSTGL SHGLSTGLST KCSESTDDLS
RCGRSSERLE RLKSNHLPSP KVGPPRAFRV GVPAFDLFPF EVWAKLQAGF WRNPDPAHLG
YGDPAGEPLL RELIAAYLRR SRGMSCTAGQ IVITSGAQEA ISLCAQLLLQ PGDEVAVENP
GYRAAGHAFA VAGGRVRGVP VDEEGLDCTR LALAGDCRLV YVTPAHQYPT GVTMSLARRL
ALLAWAERQD GWIIEDDYDG EYRYNGAPLA PLAALDRQGR VLYVGTFGKI AFPALRLGYL
VLPARLVQAF SQGRALAVRH SEVGTQCVMA EFMAQGHFQR HIRRMRRAAL SRRNVLKAGW
PVDVSGLAGM PDVAAGLHVK VDVDNFAREQ DLIAKAEAVG VEVNPLSSYW LEDSEVPVDK
RAGLVLGFAA VPEGEIAEAL MRLRKAWR
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