Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_5099 |
Symbol | |
ID | 6114101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 5657017 |
End bp | 5658978 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641624923 |
Product | diguanylate cyclase |
Protein accession | YP_001751944 |
Protein GI | 170724256 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.873917 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.160564 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAG AAGCCGAGCG CTGGAAAGAA AAATACCTTA AAAGCATCGA ACAGCAGGAA AAGCTGGAGC GGCGATGGGC AGCGCGGCTT GACCTGCTGC GTCGAGGCCT GGTGCGCAGT ACCCTGGCCG CTGAAGGCAG CGACAAGGCG GTGGACCAAT GCATGAAGGA AATGCGTGAG GTCATTCGCA GCGACAATAT GGATGCCGGG CTTGCCGGGT TGATCCCCCG TCTTGAAAAG GCCGTGCTCG ACTCCGAGCA ACGCCGCGAA ACCCGCATGA ACCAGGTCAG CGATGCGCTG ACCGCGCTCG TGACGCAGCT GCAAGGCCTG CCGTTGTCTG GTGATGTATC GCGATCGCTC AAGAAACTGG CGAAGAAACT CGACGGCGGC GTCAGCCAGT CGCGCGAGTT GCCGCCGCTG CTCGGAGAGC TGAGCGGGTT GCAGGGGCGG GCGCTGTCAT CGTTGAACAG GCCGGATGAG GATGCCAGGC CGGGCTTTTT GCAGCGCTTG TTCGGCAACC GCGAGAGCGA ACCGCGGGGT GACAACTCTT TAGAGCCGGC GGCCCCTTCT GCAATCGCTG CGCCTGAACT GCAGCCATTG CCGGACGGTC CGGTGCTGGT GGATCTACCA CCCCGGGATA TCGACGAGCT GCAGCCGTTG GTAGCACCTG AGGTTCATAA CCCAGTGCCT GTGGTGCCTG AAACGCCTGT TGCCGCACCG CCCGTTCCAG GCGAGCCTGA GCCGCACGCA CAGGAGCCGG TCGAGGTTGC ACCCGTCTGT GCTGAGCAAC CGCAGCGCAT CGAGGGCGCT CGAACCGAGC TGCCAATACA GGTCGATGAG CCACAAGCGC TCAAGCCCCT GGAAGAAACC TTCGGCGAAG ACGGACCCTA TTCACTCCCT GATGCAGTCG AGCCGCCTTA CAGTCAGGTT GCCGCGCATA TCGAGCAAAC CCTGATCGGC CTGCTCGATG ACCTCAGCCT ACCCGAACGC CACAAAGCCC AGGCACTGGA AATGCGCGAG CGCGTGGCAC GGGGGCTGAA CTGGTATGAG CTGATCCCGG TGCTCGATGA CCTGGCCGTG CTCATGCTGG CGATCACCGA CAGCGGGCAG CACGAATTCG AGACTTACCT GCAGCAGCTC AATGAGCGTC TCGAGAGCTT CCAGAGCCAC CTTCATGAAG CCAGTGCCGG TCATGCCGAC AACAGTTCTG CTGCACGCGA GCTTGACAGC CAGCTGCGTG AACAGGTCGA TGGCCTGCAA AGCAGCGTGC AAGGGGCGGT CGATGTGGAC AGCCTCAAGC ACATTCTCGA GAACCGCCTG GAAGGGCTGC TGGTCACAAT GGATGAGCAT CAGCATGAGC GTGACCGCCG CGAACAGGAG CTGGCCGGGC GCCTTCAGGG CTTAGCCGAG CGCGTCGCGA ACATGGAGCA GGAGGCCCTC GGCTACCGCG AACACCTTGA GGAAACGCGG CAGAAGGCAT TGATCGACCC GCTGACCGGG CTGCCCAATC GCGCGGCCTG GAGCGAGCAG GTAGAGCGCG AAATGCAGGC CTGGCAGGAG AACGGCGGCC ACTTGGCGAT GGCGATTCTC GACCTGGACC ATTTCAAGCG CATCAATGAC AGCTATGGCC ATCTGGCGGG CGACAAGGTA CTGAAGATCG TCGCTGACCA GTTGCGCAAG CGCTTGCGGC CGCGCGATTT CATCGCCCGT TTCGGTGGCG AGGAGTTCGT ACTGTTGCTG GCGCAGACGT CACCCACCGT AGCTGCGCAA GTGGCCGAGG TGCTGCGTGC CGCGATCGAA GCGTGTCCGT TCCATTTCAA GGGCGAACGG GTGGTTATCA CCGCCTCCAT CGGTTTGAGC GCATTCCGCT CGGGTGAGCG CGATGATCAG GTGCTAAAGC GTGCTGATGC GGCGCTGTAC CGGGCCAAGG ACCTGGGCCG TAATCGGGTG GAACAAAGCT GA
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Protein sequence | MTEEAERWKE KYLKSIEQQE KLERRWAARL DLLRRGLVRS TLAAEGSDKA VDQCMKEMRE VIRSDNMDAG LAGLIPRLEK AVLDSEQRRE TRMNQVSDAL TALVTQLQGL PLSGDVSRSL KKLAKKLDGG VSQSRELPPL LGELSGLQGR ALSSLNRPDE DARPGFLQRL FGNRESEPRG DNSLEPAAPS AIAAPELQPL PDGPVLVDLP PRDIDELQPL VAPEVHNPVP VVPETPVAAP PVPGEPEPHA QEPVEVAPVC AEQPQRIEGA RTELPIQVDE PQALKPLEET FGEDGPYSLP DAVEPPYSQV AAHIEQTLIG LLDDLSLPER HKAQALEMRE RVARGLNWYE LIPVLDDLAV LMLAITDSGQ HEFETYLQQL NERLESFQSH LHEASAGHAD NSSAARELDS QLREQVDGLQ SSVQGAVDVD SLKHILENRL EGLLVTMDEH QHERDRREQE LAGRLQGLAE RVANMEQEAL GYREHLEETR QKALIDPLTG LPNRAAWSEQ VEREMQAWQE NGGHLAMAIL DLDHFKRIND SYGHLAGDKV LKIVADQLRK RLRPRDFIAR FGGEEFVLLL AQTSPTVAAQ VAEVLRAAIE ACPFHFKGER VVITASIGLS AFRSGERDDQ VLKRADAALY RAKDLGRNRV EQS
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