Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_5043 |
Symbol | |
ID | 6114036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 5570174 |
End bp | 5570839 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641624858 |
Product | isoprenoid biosynthesis protein with amidotransferase-like domain |
Protein accession | YP_001751888 |
Protein GI | 170724200 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.13515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAAAA AAGTAGCGGT GATTCTTTCC GGCTGTGGCG TCTACGATGG CGCCGAAATC CATGAAAGCG TGATCACCCT GCTGCGCCTC GACCAGCGCG GCGCACAGGT GCAGTGCTTC GCGCCGAACA TCGCGCAGAT GCATGTGATC AACCACCTCA CCGGTGAGCA GATGCCTGAG TCGCGCAATG TACTGGTGGA ATCGGCGCGC ATCGCCCGCG GCGAGGTCAA GGACATCAGC GAGGCCAGGG CCGAGGACTT CGACGCGCTG ATCGTGCCGG GTGGTTTCGG GGCAGCGAAG AACCTGTCCG ACTTTGCCAT CGAAGGTAGC GAGTGCACGG TCAACCCGCA GGTACTGGCC TTGGCCGAGG CCTTTGCCGA AGCTTGCAAG CCGGTTGGCC TGATGTGCAT TTCACCGGCA CTGGCGGCCA AGATCTATGG CCCTGGCGTG GTTTGCACCA TCGGGAACGA TGCCGATACT GCTGCTGCGG TGACCAAGAT GGGTGGCACC CATGAAGAGT GCGATGTGCA TGACATCGTT GAGGACACCC AGCGCAAGCT GGTGACCACG CCGGCGTACA TGGTGGCCAA GTCGATCAGC GAGGCGGCTG GCGGCATTTA CAAGCTGGTG GATCGCGTGC TGGAAATGAC CCACGAGGCT GACTGA
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Protein sequence | MTKKVAVILS GCGVYDGAEI HESVITLLRL DQRGAQVQCF APNIAQMHVI NHLTGEQMPE SRNVLVESAR IARGEVKDIS EARAEDFDAL IVPGGFGAAK NLSDFAIEGS ECTVNPQVLA LAEAFAEACK PVGLMCISPA LAAKIYGPGV VCTIGNDADT AAAVTKMGGT HEECDVHDIV EDTQRKLVTT PAYMVAKSIS EAAGGIYKLV DRVLEMTHEA D
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