Gene PputW619_5043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_5043 
Symbol 
ID6114036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp5570174 
End bp5570839 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content61% 
IMG OID641624858 
Productisoprenoid biosynthesis protein with amidotransferase-like domain 
Protein accessionYP_001751888 
Protein GI170724200 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.13515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAA AAGTAGCGGT GATTCTTTCC GGCTGTGGCG TCTACGATGG CGCCGAAATC 
CATGAAAGCG TGATCACCCT GCTGCGCCTC GACCAGCGCG GCGCACAGGT GCAGTGCTTC
GCGCCGAACA TCGCGCAGAT GCATGTGATC AACCACCTCA CCGGTGAGCA GATGCCTGAG
TCGCGCAATG TACTGGTGGA ATCGGCGCGC ATCGCCCGCG GCGAGGTCAA GGACATCAGC
GAGGCCAGGG CCGAGGACTT CGACGCGCTG ATCGTGCCGG GTGGTTTCGG GGCAGCGAAG
AACCTGTCCG ACTTTGCCAT CGAAGGTAGC GAGTGCACGG TCAACCCGCA GGTACTGGCC
TTGGCCGAGG CCTTTGCCGA AGCTTGCAAG CCGGTTGGCC TGATGTGCAT TTCACCGGCA
CTGGCGGCCA AGATCTATGG CCCTGGCGTG GTTTGCACCA TCGGGAACGA TGCCGATACT
GCTGCTGCGG TGACCAAGAT GGGTGGCACC CATGAAGAGT GCGATGTGCA TGACATCGTT
GAGGACACCC AGCGCAAGCT GGTGACCACG CCGGCGTACA TGGTGGCCAA GTCGATCAGC
GAGGCGGCTG GCGGCATTTA CAAGCTGGTG GATCGCGTGC TGGAAATGAC CCACGAGGCT
GACTGA
 
Protein sequence
MTKKVAVILS GCGVYDGAEI HESVITLLRL DQRGAQVQCF APNIAQMHVI NHLTGEQMPE 
SRNVLVESAR IARGEVKDIS EARAEDFDAL IVPGGFGAAK NLSDFAIEGS ECTVNPQVLA
LAEAFAEACK PVGLMCISPA LAAKIYGPGV VCTIGNDADT AAAVTKMGGT HEECDVHDIV
EDTQRKLVTT PAYMVAKSIS EAAGGIYKLV DRVLEMTHEA D