| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_5039 |
|---|
| Symbol | |
|---|
| ID | 6114032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 5564343 |
|---|
| End bp | 5565845 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641624854 |
|---|
| Product | Ppx/GppA phosphatase |
|---|
| Protein accession | YP_001751884 |
|---|
| Protein GI | 170724196 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0248] Exopolyphosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCACA CCTTAGCGAA GAACCTGTCC CTGATTGCCG CCATCGACCT GGGCTCCAAC
AGTTTCCACA TGGTCGTGGC CAAGGCTCAC CATACCGAAA TCCGCATTCT GGAGCGGCTC
GGGGAAAAGG TTCAGCTCGC CGCTGGCATC GACGAAGCAC GCATGCTCAG CGAAGAAGCC
ATGGTCCGGG GCCTGGAATG CCTGAAGCGC TTTGCCCAGC TGATAAACGG CATGCCTGCG
GGGGCCGTGC GTATCGTTGG CACCAACGCC TTGCGCGAGG CGCGCAACCG CAACGAATTC
ATCCAGCGTG CCGAAACGAT CCTCGGCCAC CCCGTGGAAG TGATCTCCGG CCGCGAAGAA
GCGCGCCTGA TCTACTTGGG CGTGTCCCAT ACCCTGGCCG ATACCCCCGG CAAACGCCTG
GTCGCCGATA TCGGCGGCGG CAGCACCGAG TTCATCATCG GCCAGCGCTT TGAGCCGCTG
CTGCGTGAAA GCCTGCAGAT GGGCTGCGTC AGCTTCACCC AGCGCTATTT CCGCGATGGC
AAGATCACCC CGGCCCGCTA CGCCCAGGCC TACACCGCCG CGCGCCTGGA GCTGATGAGC
ATCGAGAATG CCCTGCACCG CCTGACCTGG GATGAAGCGA TTGGCTCCTC CGGGACCATC
CGCGCCATCG GCGCCGCCAT CAAGGCCGCT GGCCTGGGCA ATGGCGAGGT CAACGCCGAG
GGGCTGGCGT GGGTCAAACG CAAGCTGTTC AAGCTGGGCG AGGCCGACAA GATCGACTTC
GACGGGGTCA AACCCGACCG CCGCGCGATC TTCCCGGCCG GCATGGCGAT TCTCGAGGCG
ATCTTCGACG CGCTGGAACT GCAACGCATG GACCATTGCG ATGGCGCGCT GCGTGAAGGC
GTGCTGTTCG ACCTGCTTGG CCGCCACCAC CACGAAGACG TGCGCGAACG CACGTTGAAC
TCGCTGATGG AACGCTACCA CGTCGACCAG GGCCAGGCTG CGCGCGTCGA GCGCAAAGCG
CTGCACGCCT TTGACCAAGT GGCCAAGGCA TGGGGCCTTG AAGAGGGTAA CTGGCGCGAT
CTACTGGGTT GGGCAGCCAA AATTCACGAA ATTGGCTTGG ACATTGCCCA CTACCATTAC
CACAAGCATG GTGCCTACCT GATCGAGCAC TCCGACCTGT CGGGCTTCTC GCGTGAAGAC
CAGCAGATGA TGGCGCTGCT GGTACGTGGC CACCGCCGCA ACATCCCCAA GGACAAGTTC
GCCGAACTGG GCGATGAAGG CGTGAAACTG CTGCGTCTGT GCGTACTGCT GCGCTTCGCC
ATTCTGTTCC ACCACATCCG TGGCACCCAA CAGATGCCGA AGGTGCAACT GCAGGCCTCA
GACAATAGCC TCGACGTGGC CTTCCCGGCC GGCTGGCTGG AGCAGAATCA GCTGACCCAG
GCCGACTTCG CCAATGAGGC GGAGTGGCTG GCCCGGGTCA ACTTCGTCCT CAGCGTACGT
TAA
|
|---|
| Protein sequence | MPHTLAKNLS LIAAIDLGSN SFHMVVAKAH HTEIRILERL GEKVQLAAGI DEARMLSEEA
MVRGLECLKR FAQLINGMPA GAVRIVGTNA LREARNRNEF IQRAETILGH PVEVISGREE
ARLIYLGVSH TLADTPGKRL VADIGGGSTE FIIGQRFEPL LRESLQMGCV SFTQRYFRDG
KITPARYAQA YTAARLELMS IENALHRLTW DEAIGSSGTI RAIGAAIKAA GLGNGEVNAE
GLAWVKRKLF KLGEADKIDF DGVKPDRRAI FPAGMAILEA IFDALELQRM DHCDGALREG
VLFDLLGRHH HEDVRERTLN SLMERYHVDQ GQAARVERKA LHAFDQVAKA WGLEEGNWRD
LLGWAAKIHE IGLDIAHYHY HKHGAYLIEH SDLSGFSRED QQMMALLVRG HRRNIPKDKF
AELGDEGVKL LRLCVLLRFA ILFHHIRGTQ QMPKVQLQAS DNSLDVAFPA GWLEQNQLTQ
ADFANEAEWL ARVNFVLSVR
|
|---|
| |