| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_5037 |
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| Symbol | rho |
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| ID | 6114030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5562282 |
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| End bp | 5563541 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641624852 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_001751882 |
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| Protein GI | 170724194 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGA CTGAACTCAA GCAAAAGCCG ATTACCGATC TGCTGGAAAT GGCCGAACAG
ATGGGCATCG AAAACATGGC CCGTTCGCGC AAACAGGACG TGATTTTCGC CCTGCTGAAG
AAGCACGCGA AAAGCGGCGA AGAGATCTCA GGTGACGGCG TGCTGGAGAT TCTCCAGGAT
GGTTTCGGTT TCCTGCGTTC GGCTGATGCG TCCTATCTGG CCGGCCCTGA CGACATCTAC
GTCTCGCCCA GCCAGATCCG CCGCTTCAAC CTGCGTACCG GCGATACCAT CGTCGGCAAG
ATCCGCCCGC CGAAGGAAGG GGAGCGTTAC TTCGCGCTGC TCAAGGTCGA CACGATCAAC
TTCGATCGCC CGGAAAACGC GAAGAACAAG ATCCTCTTCG AAAACCTGAC GCCGCTGTTC
CCGAACAAGC GCCTGAAGAT GGAAGCCGGT AACGGTTCCA CCGAAGACCT GACCGGCCGC
GTCATCGACC TGTGCGCACC GATCGGCAAG GGCCAGCGTG GCCTGATCGT CGCCCCGCCG
AAAGCGGGTA AAACGATCAT GCTGCAGAAC ATCGCAGCCA ACATCACCCG TAACAACCCC
GAGTGCCACC TGATCGTTCT GCTGATCGAC GAGCGCCCGG AAGAAGTGAC CGAAATGCAG
CGCACCGTGC GCGGTGAAGT GGTTGCCTCG ACCTTCGACG AGCCGCCAAC CCGCCACGTG
CAGGTCGCCG AAATGGTCAT CGAGAAGGCC AAGCGCCTGG TCGAGCACAA GAAGGACGTG
GTCATTCTGC TCGACTCCAT CACCCGTCTG GCGCGTGCCT ACAACACCGT GATCCCGAGC
TCCGGCAAGG TGCTGACCGG TGGTGTCGAT GCCCACGCCC TGGAGAAGCC GAAGCGTTTC
TTCGGTGCTG CGCGTAACAT CGAGGAAGGC GGTTCGCTGA CCATCATCGC CACCGCGCTG
GTAGAAACCG GCTCGAAGAT GGACGAAGTG ATCTACGAAG AGTTCAAGGG TACCGGCAAC
ATGGAACTGC CCCTGGACCG TCGCATCGCC GAGAAGCGTG TGTTCCCGGC CATCAACATC
AACCGCTCGG GCACCCGCCG TGAAGAGCTG CTCACCGCCG ACGACGAACT GCAGCGCATG
TGGATCCTGC GCAAGTTGCT GCACCCGATG GACGAGATCG CCGCCATCGA GTTTTTGGTC
GACAAGCTCA AGCAGACCAA GACCAACGAC GAGTTCTTCC TGTCGATGAA GCGCAAGTAA
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| Protein sequence | MNLTELKQKP ITDLLEMAEQ MGIENMARSR KQDVIFALLK KHAKSGEEIS GDGVLEILQD
GFGFLRSADA SYLAGPDDIY VSPSQIRRFN LRTGDTIVGK IRPPKEGERY FALLKVDTIN
FDRPENAKNK ILFENLTPLF PNKRLKMEAG NGSTEDLTGR VIDLCAPIGK GQRGLIVAPP
KAGKTIMLQN IAANITRNNP ECHLIVLLID ERPEEVTEMQ RTVRGEVVAS TFDEPPTRHV
QVAEMVIEKA KRLVEHKKDV VILLDSITRL ARAYNTVIPS SGKVLTGGVD AHALEKPKRF
FGAARNIEEG GSLTIIATAL VETGSKMDEV IYEEFKGTGN MELPLDRRIA EKRVFPAINI
NRSGTRREEL LTADDELQRM WILRKLLHPM DEIAAIEFLV DKLKQTKTND EFFLSMKRK
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