| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4998 |
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| Symbol | |
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| ID | 6113990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5519663 |
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| End bp | 5520940 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641624812 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_001751843 |
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| Protein GI | 170724155 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.554548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA CCAACGAATC CTTGATGCAA CGTCGTGTAG CCGCCGTCCC ACGTGGCGTA
GGCCAGATTC ACCCGATCTT CGTCGAAAGC GCGAAGAACT CGACCGTGAT CGACGTTGAA
GGCCGCGAAC TGATCGACTT CGCCGGCGGC ATCGCAGTTC TGAACACCGG CCACCTGCAC
CCCAAAGTGG TTGCCGCTGT TCAAGAGCAG CTGACCAAAG TCAGCCACAC CTGCTTCCAG
GTACTGGCTT ACGAGCCTTA CGTAGAGCTG TGCGAGAAGA TCAACAAGCT GGTCCCAGGT
GACTTCGACA AGAAGACCCT GCTGGTTTCC ACCGGCTCCG AAGCCGTTGA GAACGCCGTG
AAAATCGCCC GTGCCGCCAC TGGCCGTGCT GGTGTAATCG CCTTCACCGG CGGCTACCAC
GGCCGCACCA TGATGACCCT GGGCCTGACC GGCAAGGTTG TGCCGTACTC CGCAGGCATG
GGCCTGATGC CGGGCGGCAT CTTCCGCGCC CTGTTCCCGA GCGAACTGCA CGGTGTCAGC
GTTGACGATG CCATCGCTTC GGTCGAGCGC ATCTTCAAGA ACGACGCCGA GCCGCGCGAC
ATCGCTGCGA TCATCCTCGA GCCGGTACAG GGCGAAGGCG GCTTCCTGCC AGCGCCTAAA
GAGCTGATGA AGCGCCTGCG CGCCCTGTGC GACCAGCACG GCATTCTGCT GATCGCCGAC
GAAGTACAGA CTGGTGCGGG CCGGACCGGC ACCTTCTTCG CCATGGAACA GATGGGCGTC
GCGCCGGACC TGACCACCTT CGCCAAATCC ATTGCTGGCG GCTTCCCGCT GGCCGGTGTT
TGCGGCAAGG CCGAGATCAT GGACGCCATC GCTCCGGGCG GCCTGGGCGG TACTTACGCC
GGTTCGCCGA TCGCCTGTGC TGCGGCTCTG GCCGTCATCC AGGTGTTCGA AGAAGAGAAG
CTGCTGGACC GCAGCAAGGC AGTAGGTGAG CACCTGACCG CTGGCCTGCG CAAGATCCAG
GAAAAGCACC CGATCATTGG CGACGTCCGT GGTCTGGGCT CGATGATCGC TGTGGAAGTC
TTCGAAAAAG GCACCCACAC CCCGAACGCC GCTGCGGTTG CCCAAGTGGT TGCCAAAGCC
CGTGACAAGG GCCTGATCCT GCTGTCTTGC GGCACCTACG GCAACGTTCT GCGTATCCTG
GTTCCGCTGA CCGCCGAAGA TGAGCTGCTC GACAAGGGCC TGGCCATCAT CGAAGAGTGC
TTCGCTGAAC TGGCCTGA
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| Protein sequence | MSKTNESLMQ RRVAAVPRGV GQIHPIFVES AKNSTVIDVE GRELIDFAGG IAVLNTGHLH
PKVVAAVQEQ LTKVSHTCFQ VLAYEPYVEL CEKINKLVPG DFDKKTLLVS TGSEAVENAV
KIARAATGRA GVIAFTGGYH GRTMMTLGLT GKVVPYSAGM GLMPGGIFRA LFPSELHGVS
VDDAIASVER IFKNDAEPRD IAAIILEPVQ GEGGFLPAPK ELMKRLRALC DQHGILLIAD
EVQTGAGRTG TFFAMEQMGV APDLTTFAKS IAGGFPLAGV CGKAEIMDAI APGGLGGTYA
GSPIACAAAL AVIQVFEEEK LLDRSKAVGE HLTAGLRKIQ EKHPIIGDVR GLGSMIAVEV
FEKGTHTPNA AAVAQVVAKA RDKGLILLSC GTYGNVLRIL VPLTAEDELL DKGLAIIEEC
FAELA
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