| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4978 |
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| Symbol | |
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| ID | 6113970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5496076 |
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| End bp | 5497407 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641624792 |
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| Product | outer membrane porin |
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| Protein accession | YP_001751823 |
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| Protein GI | 170724135 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000630026 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.206455 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAAGT CCAGCCTGGC TCTGGCCGTG GCACTGGGGG TTCTCGCCCA ACAAGCAGGC
GCTGCCGGTT TCGTTGAAGA CAGCAAATTG TCCCTCAGCT CGCGCACCAT GTATTTCAAC
GATGACAACC GTGATGGCGG TACCGACCAA GAAGAAAGTG GTCAGGGTTT CAAGCTCGAC
TACCTGTCTG GTTTCACCCA GGGTGTCGTA GGCTTTGGTG TTGATGTACA AGCGCTGTGG
GGTATTCACC TTGATGGTGG CCGTGGCAGC CGTCCAGATG CCAACAACAG CTTCTTCCCA
AGCGATTCCG ATGGGTCTGC AGTCCACGAT TGGGCACGTA TTGGCGGTAA TGCCAAGGCT
CGCTTCTCGA AGACCGAGGC CCATTTCGGT AGCGCGCTGG CTCCGAATCT GCCAATCCTG
GTTGCCAACG ATGGCCGTCT GCTGCCGCAA ACTTTTGAAG GCGGTACCAT TCAGTCGAAG
GAAATCGACA ACCTGACCAT CAACGCAGGT CAGCTGACTC ACGCCATGGG CCGTGCTTCG
AGCAACCGCA CGGGTTTGTC TGTTGCCGGC TCTGCGGTTG ACAGCAACAA GTTCTACTAC
GGCGGTCTGG ACTACAAGCT CACTCCAGAT CTGACCCTGC AGTACTACTA CTCGAACCTG
AAGGACTTCT ACAAACAGCA CTTCCTGGGT GCAACCCACG TCTTTAAACT TTCGGACGAT
TCCTCGTTCA AGACTGACCT TCGCTACTTC GACAGCAGCA GCGACGGGAA GAACGGCGAT
GGTGGTGAGT ACTTCTTCAA CAACAACGGC GGTTACGCTA AAAATGCTGG CGAGATCGAC
AACAAGACCT GGTCGGCCAT GTTCACCTAC ACCCTGGGTG GCCATGCGTT GATGGTTGGC
CATCAGCAGG TCAGCGATGA CGGTGGTTTC GTCTGGCTGA ACCAAGGTAA CGTCGAGGAT
GGTAATGGCA ACCTGGAAGG CGCTGGTGGT GCCAGCTTCT ACCTGTTCAC CGACAGCATG
ATCAACCAGT TCGCCCGCGC AGGTACCAAC ACTACGTTCG GCCAGTACAG CTATGATTTC
GCCCGTGTTG GCGTCCCTGG CCTGAAGGCG TCGGTCTCCT ACCTGCGTGG TACTGATATC
CGTAACCAAT CTGGTAGCGG TACTTACCAC GAATGGGAAC GCGACGCTCG TGTCGACTAC
GTGATTCAAG AAGGCACCTT GAAAGGTCTG GGTGCGAGCC TGCGTCACGG TATTTACCGC
GGCGAAGGCG AGGCTCCGGT CGATAAGGAC CAGACCCGCT TCATCGTGAA CTACACTTAC
AACTTCATGT AA
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| Protein sequence | MYKSSLALAV ALGVLAQQAG AAGFVEDSKL SLSSRTMYFN DDNRDGGTDQ EESGQGFKLD
YLSGFTQGVV GFGVDVQALW GIHLDGGRGS RPDANNSFFP SDSDGSAVHD WARIGGNAKA
RFSKTEAHFG SALAPNLPIL VANDGRLLPQ TFEGGTIQSK EIDNLTINAG QLTHAMGRAS
SNRTGLSVAG SAVDSNKFYY GGLDYKLTPD LTLQYYYSNL KDFYKQHFLG ATHVFKLSDD
SSFKTDLRYF DSSSDGKNGD GGEYFFNNNG GYAKNAGEID NKTWSAMFTY TLGGHALMVG
HQQVSDDGGF VWLNQGNVED GNGNLEGAGG ASFYLFTDSM INQFARAGTN TTFGQYSYDF
ARVGVPGLKA SVSYLRGTDI RNQSGSGTYH EWERDARVDY VIQEGTLKGL GASLRHGIYR
GEGEAPVDKD QTRFIVNYTY NFM
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