| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4942 |
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| Symbol | |
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| ID | 6113934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5459657 |
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| End bp | 5460763 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641624756 |
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| Product | agmatine deiminase |
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| Protein accession | YP_001751787 |
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| Protein GI | 170724099 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2957] Peptidylarginine deiminase and related enzymes |
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| TIGRFAM ID | [TIGR03380] agmatine deiminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.470202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00000068337 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAACCC TCAACTCCAC CCCCCGCGCC GACGGTTTCC ACATGCCCGC CGAATGGGCG
CCGCAAAGCC AGGTGTGGAT GGTCTGGCCC GAGCGTTCGG ACAACTGGCG CCTGGGAGGC
AAGCCTGCCC AGGCTGCCCA CGTCACCCTG GCCAAGGCCA TCGCCCGCTT CGAGCCGGTT
ACCGTTGCTG TTTCTGCCGG CCAGTACGAA AACGCCCGTC GGCAGCTCGA CCTGCCCAAC
ATCCGTGTGG TGGAAATCAG CAACGACGAC GCCTGGGTGC GTGATACCGG CCCGACCTTC
GTCATCAACG ATTCGGGCGA AGTGCGCGGT GTGGATTGGG GCTTCAACGC CTGGGGCGGC
TTCGACGGCG GCTTGTACGC GCCGTGGAAC CGCGATGAGG AGCTGGCAGC CAAGGTGCTG
GAGATGGAGC GTTGCCAGCG CTACCAGACC GAAGGCTTCG TGCTTGAGGG CGGATCGATC
CATGTGGATG GTGAGGGCAC CCTGATCACT ACCGAAGAAT GCCTGCTCAA CCGCAACCGC
AACCCGCACC TGAACCGTGA GCAGATTGAA GAGATCCTGC GTGAGCACCT GGCGGTGGAG
ACCATCGTCT GGCTGCCCGA TGGCCTGTAC AACGACGAAA CCGACGGCCA CGTGGACAAC
TTCTGCTGTT ACGTCAGCCC AGGCGAAGTG TTACTGGCCT GGACCGATGA TTCCAACGAC
CCCAACTATG CGCGCTGCCA TGCCGCCTAT GAGGTGCTGA AAAACAGCCG CGATGCCAAA
GGCCGCGAGT TTGTGGTGCA CAAGATGCCC ATTCCTGGCC CGCTGTTCGC CACTGAAGAA
GAGTGCGCCG GCGTCGATCA CGTGGTCGGT AGCCAGGAGC GAGACCCGTC GGTACGCCTG
GCCGGGTCCT ACGTGAACTT CCTGATCGTC AACGGCGGCA TCATCGCGCC AAGCTTCAAT
GACCCGGCAG ATGCCCAGGC CAGAGCCATT CTGGCCAAAG TATTCCCGGA CCACGAAGTG
GTGATGATCC CCGGGCGTGA ACTGCTGCTG GGGGGTGGCA ACATTCACTG CCTGACTCAG
CAGCAACCGG CGCCGGTCAA GCGCTGA
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| Protein sequence | MKTLNSTPRA DGFHMPAEWA PQSQVWMVWP ERSDNWRLGG KPAQAAHVTL AKAIARFEPV
TVAVSAGQYE NARRQLDLPN IRVVEISNDD AWVRDTGPTF VINDSGEVRG VDWGFNAWGG
FDGGLYAPWN RDEELAAKVL EMERCQRYQT EGFVLEGGSI HVDGEGTLIT TEECLLNRNR
NPHLNREQIE EILREHLAVE TIVWLPDGLY NDETDGHVDN FCCYVSPGEV LLAWTDDSND
PNYARCHAAY EVLKNSRDAK GREFVVHKMP IPGPLFATEE ECAGVDHVVG SQERDPSVRL
AGSYVNFLIV NGGIIAPSFN DPADAQARAI LAKVFPDHEV VMIPGRELLL GGGNIHCLTQ
QQPAPVKR
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