Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4885 |
Symbol | |
ID | 6113875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 5394623 |
End bp | 5395876 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641624697 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_001751730 |
Protein GI | 170724042 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.994809 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.551008 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAGCA AGCAAGACCA GATCCAGGGT TACGACGACG CACTGCTGGC GGCGATGAAT GCCGAAGAAC AGCGCCAGGA AGATCACATC GAGCTGATCG CCTCGGAGAA CTACACCAGC AAGCGCGTCA TGCAGGCCCA AGGCAGCGGC CTGACCAACA AGTACGCCGA AGGCTACCCA GGCAAGCGCT ACTACGGTGG CTGCGAGCAC GTCGACAAAG TCGAGGCGCT GGCCATCGAG CGCGCCAAGC AGCTGTTCGG TGCCGACTAC GCCAACGTTC AGCCACATTC CGGCTCTTCG GCCAACAGCG CCGTGTATCT GGCTCTGCTG CAGGCCGGTG ACACCATCCT GGGCATGAGC CTGGCCCACG GCGGCCACCT GACCCACGGC GCCAAAGTGT CGTCCTCGGG CAAGCTGTAC AACGCGGTGC AATACGGCAT CGACACCAAC ACCGGTCTGA TCGACTACGA CGAAGTCGAG CGCCTGGCCG TCGAGCACAA GCCGAAGATG ATCGTTGCCG GCTTCTCGGC CTATTCCAAG ACCCTCGACT TCCCGCGTTT TCGCGCCATC GCAGACAAGG TCGGTGCGCT GTTGTTCGTC GACATGGCCC ACGTTGCCGG CCTGGTTGCC GCTGGCCTGT ACCCGAACCC GATCCCGTTC GCCGACGTGG TGACCACCAC TACCCACAAG ACCCTGCGCG GCCCACGTGG CGGCCTGATC CTGGCCAAGT CGAACGAAGA GATCGAGAAA AAGCTCAACG CCGCCGTCTT CCCCGGCGCC CAGGGCGGCC CGCTGATGCA CGTCATCGCA GCCAAGGCTG TGTGCTTCAA GGAAGCTCAG GAGCCTGAGT TCAAGAGCTA CCAGAAGCAG GTCATCGAGA ACGCCCAGGC CATGGCCCAA GTGTTCATCG ACCGCGGCTA CGACGTGGTC TCCGGCGGTA CCGACAACCA CCTGTTCCTG GTCAGCCTGA TCCGCCAGGG CCTGACCGGC AAAGATGCCG ACGCTGCCTT GGGCCGCGCG CACATCACCG TCAACAAAAA CGCTGTGCCG AACGACCCGC AGTCGCCGTT CGTCACTTCC GGCCTGCGCA TCGGCACCCC GGCTGTCACC ACACGCGGCT TCAAGGTCGC CCAGTGTGTG GCCCTGGCCG GCTGGATCTG CGACATCCTC GATAACCTCG GTGACGCTGA TGTCGAAGCC GATGTGGCGA AGAACGTCGC GGCTCTGTGC ACAGACTTCC CTGTTTACCG CTGA
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Protein sequence | MFSKQDQIQG YDDALLAAMN AEEQRQEDHI ELIASENYTS KRVMQAQGSG LTNKYAEGYP GKRYYGGCEH VDKVEALAIE RAKQLFGADY ANVQPHSGSS ANSAVYLALL QAGDTILGMS LAHGGHLTHG AKVSSSGKLY NAVQYGIDTN TGLIDYDEVE RLAVEHKPKM IVAGFSAYSK TLDFPRFRAI ADKVGALLFV DMAHVAGLVA AGLYPNPIPF ADVVTTTTHK TLRGPRGGLI LAKSNEEIEK KLNAAVFPGA QGGPLMHVIA AKAVCFKEAQ EPEFKSYQKQ VIENAQAMAQ VFIDRGYDVV SGGTDNHLFL VSLIRQGLTG KDADAALGRA HITVNKNAVP NDPQSPFVTS GLRIGTPAVT TRGFKVAQCV ALAGWICDIL DNLGDADVEA DVAKNVAALC TDFPVYR
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