Gene PputW619_4779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4779 
Symbol 
ID6113768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp5267433 
End bp5268077 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content60% 
IMG OID641624590 
ProductcAMP-regulatory protein 
Protein accessionYP_001751624 
Protein GI170723936 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.345439 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGCCT CAGCCCTACC CGCCAAGATC AAGAACATCG ACAAGCTGCT GATGCACTGC 
CAGCGCCGCC GCTACACTGC AAAGAGTAAT ATCATCTGTG CTGGTGACCG GGCCGAAACG
CTGTCGTTCA TCATCAAGGG TTCAGTCACT ATCCTCATTG AGGATGACGA AGGCCACGAG
ATGATCATCG CCTACCTCAA CAGTGGCGAT TTCTTCGGCG AGCTGGGTTT GTTCGAACCC
GCCGGCAGCG ATCAGCAGCG CAGCGCCTGG GTGCGCGCCA AGACAGAGTG CGAGGTAGCG
GAGGTCAGTT ATGACAAGTT TCGCGACCTG GCCCGCCAGG ACCCGGATAT TCTTTACTCC
CTCGGCAGCC AGATGGCCCA GCGCCTGCGC AACACCACGC GCAAGGTGGG CGACCTGGCG
TTCTTCGATG TTACTGGCCG AGTCGCCCGT TGCCTGCTGG ACCTGTGCAA GCAGCCAGAC
GCCATGACCC ACCCGGACGG CATGCAAATC AAGATCACCC GCCAGGAAAT TGGCCGTATC
GTCGGTTGCT CGCGGGAAAT GGTCGGCCGC GTGCTCAAGG ACCTCGAGGA ACGCAGCCTG
GTTCAGGTCA AGGGCAAGAC CATGGTGGTT TACGGTACCC GTTAA
 
Protein sequence
MVASALPAKI KNIDKLLMHC QRRRYTAKSN IICAGDRAET LSFIIKGSVT ILIEDDEGHE 
MIIAYLNSGD FFGELGLFEP AGSDQQRSAW VRAKTECEVA EVSYDKFRDL ARQDPDILYS
LGSQMAQRLR NTTRKVGDLA FFDVTGRVAR CLLDLCKQPD AMTHPDGMQI KITRQEIGRI
VGCSREMVGR VLKDLEERSL VQVKGKTMVV YGTR