Gene PputW619_4767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4767 
Symbol 
ID6113756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp5256690 
End bp5257889 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content58% 
IMG OID641624578 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_001751612 
Protein GI170723924 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0162] Tyrosyl-tRNA synthetase 
TIGRFAM ID[TIGR00234] tyrosyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.95797e-06 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.701844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCGG TTGAAGAGCA GCTGGCGCTT ATCAAGCGCG GTGCGGAAGA AGTGTTGGTC 
GAGTCGGAAC TGGTGGAGAA GCTCAAGCGT GGCCAGCCTC TGCGTATCAA GGCAGGTTTC
GATCCGACCG CGCCTGACCT GCACCTAGGG CACACCGTGC TGATCAACAA GCTGCGTCAG
TTCCAGGAGC TTGGTCATCA GGTCGTCTTC CTGATCGGCG ACTTCACCGG AATGATCGGT
GATCCGAGCG GCAAAAGTGC GACTCGTCCG CCGCTGACCC GTGAGCAGGT GCTGGATAAT
GCCGAGACGT ACAAGCAGCA GGTGTTCAAG ATTCTCGACC CGGCCAAGAC CGAGGTCGCG
TTCAACTCCA CCTGGATGGA CAAGCTGACA CCTGCTGACT TCATCCGCCT CGCGTCGCAG
TACACGGTGG CGCGCATGCT TGAGCGCGAC GATTTCGACA AGCGCTATAC CACCAATCAG
CCGATCGCCA TTCATGAGTT CCTTTACCCG CTGGTGCAGG GGTATGACTC GGTAGCTCTC
AAGGCTGATG TGGAGCTGGG TGGTACCGAC CAGAAGTTCA ACTTGCTGAT GGGGCGCGAG
CTGCAGCGCG CTTACGGACA GGAAGCGCAG TGCATCGTGA CCATGCCGCT GCTCGAAGGG
CTGGACGGCG TGAAGAAAAT GTCCAAGTCG CTGGGCAACT ATGTAGGTAT CCAGGAAGCG
CCTGGTGTGA TGTACAGCAA GCTGGTGTCG ATCCCGGACA CGCTGATGTG GCGTTACTTC
GAGTTGCTGA GTTTCCGTTC CATGGATGAG ATCGAGCAGT TCCGTGCCGA TGTCGCCAAT
GGTGCGAACC CGCGCGACAT CAAGATCAAG CTGGCGGAAG AAATCGTTGC GCGTTTCCAT
GGTGAAGAAG CGGCTGCCAA TGCCCATCGC GCGGCGGGTA ATCGCATGAA AGAGGGTGAG
TTGCCAGAAG ATCTTCCCGA GATTGAGGTG GCCGCTGCTG AAGACTTGCC GATCGCTGCT
GTACTGAACC GTGCTGGCCT GGTGAAGAAC TCGGCGATGG CGCGCGACCT GCTCAATGGT
GGTGCGGTCA AGGTTGATGG TGTTGTGGTT GAGCGTGACT TTATGTTTGC GCTTGGCGCC
ACTCATGTGT GCCAGGCGGG CAAGAAGGCG TTTGCCCGGG TCAAGCTCAA GGCAGGGTGA
 
Protein sequence
MKSVEEQLAL IKRGAEEVLV ESELVEKLKR GQPLRIKAGF DPTAPDLHLG HTVLINKLRQ 
FQELGHQVVF LIGDFTGMIG DPSGKSATRP PLTREQVLDN AETYKQQVFK ILDPAKTEVA
FNSTWMDKLT PADFIRLASQ YTVARMLERD DFDKRYTTNQ PIAIHEFLYP LVQGYDSVAL
KADVELGGTD QKFNLLMGRE LQRAYGQEAQ CIVTMPLLEG LDGVKKMSKS LGNYVGIQEA
PGVMYSKLVS IPDTLMWRYF ELLSFRSMDE IEQFRADVAN GANPRDIKIK LAEEIVARFH
GEEAAANAHR AAGNRMKEGE LPEDLPEIEV AAAEDLPIAA VLNRAGLVKN SAMARDLLNG
GAVKVDGVVV ERDFMFALGA THVCQAGKKA FARVKLKAG