Gene PputW619_4763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4763 
Symbol 
ID6113746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp5247120 
End bp5248313 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content57% 
IMG OID641624568 
Productelongation factor Tu 
Protein accessionYP_001751608 
Protein GI170723920 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000500279 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.983008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGG AAAAGTTTGA TCGTTCCCTT CCCCACGTTA ACGTCGGCAC TATCGGCCAC 
GTTGACCACG GTAAGACCAC TCTGACCGCA GCTCTGACTC GCGTTTGCTC CGAAGTTTTC
GGCTCGGCAA TCGTTGAGTT CGACAAGATC GACTCGGCTC CGGAAGAAAA AGCGCGCGGT
ATCACCATCA ACACCGCTCA CGTTGAGTAC AACTCGACCA TTCGTCACTA CGCTCACGTT
GACTGCCCAG GTCACGCTGA CTACGTGAAG AACATGATCA CCGGTGCTGC CCAGATGGAC
GGCGCGATCC TGGTTTGCTC GGCCGCCGAT GGTCCGATGC CACAAACCCG TGAGCACATC
CTGCTGTCCC GTCAGGTTGG CGTTCCGTAC ATCGTGGTCT TCCTGAACAA GGCTGACCTG
GTAGACGACG CTGAGCTGCT GGAACTGGTC GAGATGGAAG TTCGCGACCT GCTGTCCACC
TACGACTTCC CAGGCGACGA CACTCCGATC ATCATCGGTT CCGCTCGTAT GGCCCTGGAA
GGCAAAGATG ACAACGAAAT GGGCACTACC GCTGTCAAGA AGCTGGTAGA AACTCTGGAC
AGCTACATTC CTGAGCCAGT TCGTGCCATC GACCAGCCGT TCCTGATGCC GATCGAAGAC
GTATTCTCGA TCTCGGGTCG TGGTACCGTT GTTACCGGTC GTATCGAGCG TGGTATCGTC
CGCGTTCAGG ATCCGCTGGA AATCGTTGGT CTGCGTGACA CCACCACCAC CACCTGCACC
GGTGTTGAGA TGTTCCGCAA GCTGCTGGAC GAAGGTCGTG CTGGCGAGAA CTGCGGCGTT
CTGCTGCGTG GTACCAAGCG TGACGACGTT GAGCGTGGCC AGGTTCTGGT CAAGCCAGGT
TCGGTCAAGC CGCACACCAA GTTCACCGCA GAAGTCTACG TTCTGTCGAA GGAAGAAGGC
GGCCGTCACA CTCCGTTCTT CAAAGGCTAC CGTCCTCAGT TCTACTTCCG TACCACTGAC
GTGACCGGTA ACTGCGAACT GCCGGAAGGC GTTGAAATGG TAATGCCAGG TGACAACATT
CAGATGACTG TTACCCTGAT CAAGACCATC GCAATGGAAG ACGGTCTGCG CTTCGCTATC
CGTGAAGGCG GCCGTACCGT CGGCGCCGGC GTCGTAGCAA AAATTATCGA ATAA
 
Protein sequence
MAKEKFDRSL PHVNVGTIGH VDHGKTTLTA ALTRVCSEVF GSAIVEFDKI DSAPEEKARG 
ITINTAHVEY NSTIRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI
LLSRQVGVPY IVVFLNKADL VDDAELLELV EMEVRDLLST YDFPGDDTPI IIGSARMALE
GKDDNEMGTT AVKKLVETLD SYIPEPVRAI DQPFLMPIED VFSISGRGTV VTGRIERGIV
RVQDPLEIVG LRDTTTTTCT GVEMFRKLLD EGRAGENCGV LLRGTKRDDV ERGQVLVKPG
SVKPHTKFTA EVYVLSKEEG GRHTPFFKGY RPQFYFRTTD VTGNCELPEG VEMVMPGDNI
QMTVTLIKTI AMEDGLRFAI REGGRTVGAG VVAKIIE