Gene PputW619_4734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4734 
SymbolrplF 
ID6113716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp5222648 
End bp5223181 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content57% 
IMG OID641624538 
Product50S ribosomal protein L6 
Protein accessionYP_001751579 
Protein GI170723891 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000597715 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.617382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGCG TCGCTAAGAA CCCCGTTAAG CTGCCAGCTG GTGTCGAAGT CAAATTCGCC 
GGTCAGCAGC TTTCGGTGAA GGGTGCCAAA GGCACTCTCG AACTGAACGT TCACTCGTCT
GTTGAAGTTA CCGAAGAGTC CGGCGAACTG CGTTTCGTCG CTCGCAACGG TGATCAGCAA
GCTCGCGCCA TGGCCGGTAC TACCCGTGCT CTGGTCAACA ACATGGTCCA GGGCGTAAGC
CAAGGCTTTG AGCGCAAGCT CCAGCTGGTC GGTGTTGGTT ACAAGGCACA GGCTAAAGGC
ACCGTCCTGA ACCTGGCTCT GGGCTTCTCG CATCCAGTGG ACTACGAACT GCCAGCCGGT
ATCACTGCTG AAACTCCCAG CCAAACCGAC ATCCTGATCA AGGGTATCGA CAAGCAGCTG
GTAGGTCAGG TGGCCGCTGA AATCCGCGAC TTCCGTCCGC CAGAGCCTTA CAAAGGCAAG
GGTGTGCGTT ACGCGGACGA AGTAGTCCGT CGTAAAGAAG CCAAGAAGAA GTAG
 
Protein sequence
MSRVAKNPVK LPAGVEVKFA GQQLSVKGAK GTLELNVHSS VEVTEESGEL RFVARNGDQQ 
ARAMAGTTRA LVNNMVQGVS QGFERKLQLV GVGYKAQAKG TVLNLALGFS HPVDYELPAG
ITAETPSQTD ILIKGIDKQL VGQVAAEIRD FRPPEPYKGK GVRYADEVVR RKEAKKK