| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4731 |
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| Symbol | rpmD |
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| ID | 6113713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5221604 |
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| End bp | 5221780 |
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| Gene Length | 177 bp |
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| Protein Length | 58 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641624535 |
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| Product | 50S ribosomal protein L30 |
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| Protein accession | YP_001751576 |
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| Protein GI | 170723888 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1841] Ribosomal protein L30/L7E |
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| TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000152085 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.600234 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAACCG TAAAAGTAAC GCTGATCAAG AGCGTCTCGG GCCGTATCCC TAACCACAAA
CTGTGCGTTA AAGGTCTGGG TCTGCGTCGC ATCGGTCACA CTGTAGAAGT CCAGGATACT
CCCGAGAACC GCGGGATGAT CAACAAGGCT TACTACATGC TGCGCGTCGA GGGTTAA
|
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| Protein sequence | MATVKVTLIK SVSGRIPNHK LCVKGLGLRR IGHTVEVQDT PENRGMINKA YYMLRVEG
|
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