| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4729 |
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| Symbol | secY |
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| ID | 6113711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5219834 |
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| End bp | 5221165 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641624533 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_001751574 |
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| Protein GI | 170723886 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0376135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.430849 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAGC AAGGTGCTCT CTCTTCGCTC GGTAAGGGCG GGATGTCGGA ACTCTGGGCT
CGTCTGCGCT TTCTGTTCAT GGCGATCATC GTCTATCGGA TAGGTGCGCA TATCCCGGTT
CCAGGCATCA ATCCGGACCG TCTGGCGGAT CTGTTTCGGC AGAATGAGGG GACCATTCTT
AGCTTGTTCA ACATGTTTTC CGGTGGCGCG CTTGAGCGCA TGAGCATTTT TGCATTGGGG
ATCATGCCGT ACATCTCGGC ATCGATCATC ATGCAGCTGA TGACGGCGGT CAGCCCGCAA
CTGGAGCAGT TGAAGAAGGA AGGTGAAGCT GGCCGTCGCA AGATCAGCCA GTACACCCGC
TACGGCACCG TTATTCTGGC GCTGGTTCAA GCTATTGGCA TGTCCATTGG CCTGGCCAAC
CAGGGCGTGG CGTTTTCTGC GGGCCTTGGC TTCCATGTCG TCGCGGTTTC CACGTTTGTG
GCAGGCGCGA TGTTCATGAT GTGGCTGGGT GAGCAGATCA CCGAGCGCGG TGTGGGCAAC
GGTATCTCGA TGTTGATCTT CGCAGGTATC GTTGCCGGTC TTCCGAGAGC AATCGGGCAG
TCTTTCGAGT CTGCGCGCAC AGGCGATATC AACATCTTCG CCCTGGTCGC TATCGGTTTG
CTGGCAGTAG CGATTATCGG TTTTGTGGTG TTCATTGAGC GTGGTCAGCG TCGTATCGCC
GTTCACTACG CCAAGCGTCA GCAGGGCCGC AAGGTCTTTG CAGCGCAGAC CAGCCACTTG
CCGCTGAAAG TGAACATGGC GGGGGTTATC CCGGCCATTT TCGCGAGCAG CATTCTGCTG
TTCCCGGCTT CGCTGGGTGC CTGGTTCGGT CAGTCCGAAG GTATGGGCTG GCTGCAGGAC
ATCTCGCAGT CGATCGCTCC TGGTCAGCCG TTGAATATTC TGCTGTTTAG TGCAGGGATC
ATTTTCTTCT GCTTCTTCTA CACAGCGTTG ATGTTCAACC CGAAAGACGT AGCGGAAAAC
CTGAAGAAGT CCGGTGCCTT TATTCCGGGT ATCCGTCCTG GTGAGCAGTC GGCGCGCTAT
ATTGATGGCG TTCTGACTCG TCTGACCATG TTCGGTGCTC TTTACATGAT GGCCGTCTGC
CTTCTGCCCC AGTTCCTGGT GGTGGCAGCA AATGTGCCGT TCTACCTTGG CGGGACCTCG
TTGCTGATTG TGGTAGTGGT TGTGATGGAC TTCATGTCCC AAGTACAATC GCACCTCGTT
TCGCACCAGT ACGAATCCCT GATGAAGAAA GCCAACCTGA AAGGCTACGG TGGCAGCGGT
TTGCTGCGCT GA
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| Protein sequence | MAKQGALSSL GKGGMSELWA RLRFLFMAII VYRIGAHIPV PGINPDRLAD LFRQNEGTIL
SLFNMFSGGA LERMSIFALG IMPYISASII MQLMTAVSPQ LEQLKKEGEA GRRKISQYTR
YGTVILALVQ AIGMSIGLAN QGVAFSAGLG FHVVAVSTFV AGAMFMMWLG EQITERGVGN
GISMLIFAGI VAGLPRAIGQ SFESARTGDI NIFALVAIGL LAVAIIGFVV FIERGQRRIA
VHYAKRQQGR KVFAAQTSHL PLKVNMAGVI PAIFASSILL FPASLGAWFG QSEGMGWLQD
ISQSIAPGQP LNILLFSAGI IFFCFFYTAL MFNPKDVAEN LKKSGAFIPG IRPGEQSARY
IDGVLTRLTM FGALYMMAVC LLPQFLVVAA NVPFYLGGTS LLIVVVVVMD FMSQVQSHLV
SHQYESLMKK ANLKGYGGSG LLR
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