| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4693 |
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| Symbol | |
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| ID | 6113675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5182539 |
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| End bp | 5183081 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641624498 |
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| Product | oligoribonuclease |
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| Protein accession | YP_001751539 |
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| Protein GI | 170723851 |
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| COG category | [A] RNA processing and modification |
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| COG ID | [COG1949] Oligoribonuclease (3'->5' exoribonuclease) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAACC CACAGAACCT GATCTGGATC GATCTGGAAA TGACCGGCCT GGATCCGGAC
AGCGACGTCA TCATCGAGAT GGCCACCATC GTCACCGACA GCGAGCTGAA CACGCTGGCC
GAAGGGCCGG TGATAGCCAT CCACCACAGT GACGAAGTGC TGGCGCGCAT GGATGAGTGG
AATACCCGCA CCCATGGTGG CTCGGGGCTG ACCCAGCGTG TACGCGAAAG CAAGGTCAGC
ATGGCCGAGG CCGAAGCGCA GACCATCGCC TTCCTGGAAC AATGGGTTCC CAAAGGCAAG
TCGCCAATCT GTGGCAACAG CATCTGCCAG GACCGCCGCT TCCTCTATCG CCATATGCGC
AGCCTGGAAA ACTACTTCCA CTACCGCAAC CTTGATGTCT CCACCGTGAA GGAGCTTGCT
GCGCGCTGGG CACCGGACGT GCGGGACAGC TTCAAGAAGG GCAGCACCCA CTTGGCGCTG
GACGATATCC GCGAGTCTAT CGCCGAACTG CGCCACTACC GTACGCACTT CATCAAGGTG
TGA
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| Protein sequence | MQNPQNLIWI DLEMTGLDPD SDVIIEMATI VTDSELNTLA EGPVIAIHHS DEVLARMDEW
NTRTHGGSGL TQRVRESKVS MAEAEAQTIA FLEQWVPKGK SPICGNSICQ DRRFLYRHMR
SLENYFHYRN LDVSTVKELA ARWAPDVRDS FKKGSTHLAL DDIRESIAEL RHYRTHFIKV
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