| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4657 |
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| Symbol | |
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| ID | 6113638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5142383 |
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| End bp | 5143684 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641624463 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001751506 |
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| Protein GI | 170723818 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.123215 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00142103 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCCACTG CCAAAACTGC CTCCGTTTCC GAAACCCAAG GTTTCGATCT CAAACGCAGC
CTGCTGGAGA CCATCGTCGC CGGCCTGCTC GCGCTCATTG TCTTTGGTCC GGTCGTCGGC
GTGGTGCTCG ACGGCTACAG CTTCAATGCC GAACCCCGCC GCGTGGCCTG GCTGGTCGGT
GGCGTGATGG CCGGGCGCTT CCTGCTCAGC CTGTATCTGC AGACCGCAGC AGGCAAACGC
ATGTTGCAAG GCTTCGACAG CGGCGGCTCG GGGGTGCACG TCAATGCACC GAACTACAAG
TCGCGTCTGC GTTACATCAT TCCGGCGCTG ATCGTGATCG CAATCGTCTT CCCCATCTTC
GCCAACAAGT ACCTGCTGAC CGTGGTCATC CTCGGCCTGA TCTACGTGCT GCTGGGCCTT
GGCCTGAACA TCGTGGTGGG CCTGGCGGGC CTGCTCGACC TGGGCTACGT GGCGTTCTAC
GCCATCGGCG CCTATGGCCT GGCGCTGGGC TACCAGTACC TGGGGCTGGG GTTCTGGAGT
GTGCTGCCAC TGGCGGCCAT CGCCGCAGCT CTGGCGGGGT GCATACTGGG CTTCCCGGTG
TTGCGCATGC ACGGTGACTA CCTGGCGATC GTGACCCTGG GCTTTGGCGA GATCATCCGG
CTGGTACTGA ACAACTGGCT GTCGTTCACC GGTGGCCCGA ACGGCATGCC GGCCCCGGCG
CCGACCTTTT TTGGCCTGGA GTTCGGCCGT CGAGCCAAGG ATGGCGGGGT GCCGATCCAC
GAGTACTTCG GCTTCGATTA CAACGCCAAT CTGAAGTTCG TGTTCATCTA TGCCGTGCTG
TTCCTGGTCG TGCTGGCGGT GCTGTACATC AAGCATCGGC TGACCCGCAT GCCGGTTGGC
CGCGCTTGGG AAGCGCTGCG TGAAGACGAA ATCGCCTGCC GCTCGATGGG CCTGAACCAT
GTGCTGGTCA AGCTTTCGGC CTTCACCCTC GGGGCCTCCA CTGCGGGCCT TGCCGGGGTG
TTCTTCGCCA CCTACCAAGG CTTCGTCAAC CCGTCCTCGT TCACGTTCTT CGAGTCGGCG
CTGATTCTGG CCATTGTCGT ACTTGGCGGC ATGGGTTCGA CCGTGGGCGT AGTGATCGCT
GCGTTCGTAC TGACTGTAGC GCCGGAGCTG CTGCGCAGCT TCTCCGAATA CCGGGTGCTG
CTGTTCGGTG TGCTGATGGT GCTGATGATG ATCTGGCGAC CGCGTGGGCT GATCCGCATC
AGCCGTACCG GTGTGGTCCC GCGTAAAGGA GTCGCGCCAT GA
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| Protein sequence | MSTAKTASVS ETQGFDLKRS LLETIVAGLL ALIVFGPVVG VVLDGYSFNA EPRRVAWLVG
GVMAGRFLLS LYLQTAAGKR MLQGFDSGGS GVHVNAPNYK SRLRYIIPAL IVIAIVFPIF
ANKYLLTVVI LGLIYVLLGL GLNIVVGLAG LLDLGYVAFY AIGAYGLALG YQYLGLGFWS
VLPLAAIAAA LAGCILGFPV LRMHGDYLAI VTLGFGEIIR LVLNNWLSFT GGPNGMPAPA
PTFFGLEFGR RAKDGGVPIH EYFGFDYNAN LKFVFIYAVL FLVVLAVLYI KHRLTRMPVG
RAWEALREDE IACRSMGLNH VLVKLSAFTL GASTAGLAGV FFATYQGFVN PSSFTFFESA
LILAIVVLGG MGSTVGVVIA AFVLTVAPEL LRSFSEYRVL LFGVLMVLMM IWRPRGLIRI
SRTGVVPRKG VAP
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