Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4618 |
Symbol | cobH |
ID | 6113599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 5104368 |
End bp | 5104994 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641624424 |
Product | precorrin-8X methylmutase |
Protein accession | YP_001751467 |
Protein GI | 170723779 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2082] Precorrin isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.427711 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTGATT ACATCCGCGA TGGTCAGGAG ATCTATCGCA ATTCCTTCCG GATCATCCGT GAGGAGGCCC GGCTCGAGCG GATCCCCGCA GACCTCGAGA AGCTCGCCGT ACGTGTGATC CATGCCTGTG GCATGGTCGA GGCCATCGAC GGCCTGCAGT TCTCCGAAGG TGCCGGCCGC GCGGGGCGCG AGGCCCTGGC CAACGGCGCG CCGATCCTCT GCGATGCACA CATGGTCGCC GAAGGCATCA CCCGTGCACG CCTGCCCGCC GATAACAAGG TGATCTGCAC CCTGCGCGAC CCGAGTGTTC CGGCCCTGGC CAAAGATGCC GGCAATACCC GCTCGGCTGT GGCTCTGGAG CTGTGGCGGC CCTATCTGGA GGGTAGCGTG GTGGTGATCG GCAACGCGCC GACCGCTCTG TTCTACTTGC TGGAAATGAT CGATGCCGGT GCACCAAAGC CTGCGCTGAT CCTCGGTTTC CCGGTTGGCT TCGTCGGTGC GGCGGAGTCC AAGGCCATGC TTGCCGCAGA CAGCCGGGGC ATCCCGTTCG TGATCATGCA GGGCCGCCTG GGCGGTAGTG CGATGGCTGC TGCCGCGGTC AATGCCCTCG CCACGGAGGT GGAATGA
|
Protein sequence | MIDYIRDGQE IYRNSFRIIR EEARLERIPA DLEKLAVRVI HACGMVEAID GLQFSEGAGR AGREALANGA PILCDAHMVA EGITRARLPA DNKVICTLRD PSVPALAKDA GNTRSAVALE LWRPYLEGSV VVIGNAPTAL FYLLEMIDAG APKPALILGF PVGFVGAAES KAMLAADSRG IPFVIMQGRL GGSAMAAAAV NALATEVE
|
| |