| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4598 |
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| Symbol | |
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| ID | 6113579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5078664 |
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| End bp | 5080577 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641624404 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_001751447 |
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| Protein GI | 170723759 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0659709 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTAC GACGCACACG CAAAGACGAT GGTAGCCAAT GGACCGTGGC CGACAGCCGC
AGTGTTTATG GTATCCGCCA TTGGGGCGCT GGTTATTTCG CCATCAATGA GGCCGGGCGC
GTCGAAGTAC GCCCCAACGG CCCTCAGAGC GCGCCGATCG ACTTGTTCGA GCAGGTCGAT
GAGCTGCGCC AGAGCGGCCT GTCGCTGCCG CTGCTGGTCC GCTTCCCCGA CATTCTGCAG
GACCGCGTGC GCCAGTTGAC CGGTGCCTTC GATGCCAATA TCGCGCGCCT TGAGTACCAG
AGCCAGTACA CCGCGCTGTA CCCGATCAAG GTCAACCAAC AGGAAGCGGT GGTAGAGAAC
ATCATCGCCA CGCAGAACGT TTCCATCGGC CTGGAAGCAG GCTCCAAGCC TGAGCTGCTG
GCGGTGCTGG CGCTGGCCCC TAAGGGCGGC ACCATCGTCT GCAACGGCTA CAAGGACCGC
GAGTTCATTC GCCTGGCGCT GATGGGCCAG AAGCTCGGCC ACAATGTGTT CATCGTCATC
GAGAAAGAGT CCGAAGTGGC GCTGGTTATC GAAGAGGCCG CCGAACTCAA GGTCAAGCCG
CAGGTGGGGC TGCGCGTTCG CCTGTCATCG CTGGCTTCGA GCAAATGGGC AGACACCGGT
GGTGAGAAGT CCAAGTTCGG CCTTTCTGCT GCCCAGCTGA TTTCGGTTGT GCAGCGCTTC
CGCGATGCCG GGCTGGACCA GGGCATCCGC CTGCTGCACT TCCACATGGG TTCACAGATC
GCCAACCTGG CCGACTACCA GCACGGTTTC AAGGAAGCGA TCCGCTACTA CGGCGAGCTG
CGTGCCCTGG GCCTGCCGGT CGACCATATC GACGTGGGCG GTGGCCTGGG TGTGGACTAC
GACGGTACCC ACTCGCGCAA CGCCAGTTCG ATCAACTACG ACATGGACGA CTATGCCGGC
GTGGTGGTGG GCATGCTCAA GGAGTTCTGC GACGCGCAGG GCTTGCCGCA TCCGCACATT
TTCTCCGAGA GTGGCCGTTC GCTGACTGCG CACCACGCCA TGCTGGTGAT ACAGGTGACC
GACGTCGAGA AACACAACGA CGACGTGCCG ACCATCGAGA ACAAGGAAAG CCTGCCCGAG
ACCGTGCAGT GGCTGGCCGA CCTGCTCGGC CCGACCGATA TCGAGATGGT CACCGAGACC
TACTGGCGCG CCACGCACTA CATGGGTGAC GTGGCAGCGC AATATGCCGA TGGCAAGATC
AGCCTGGCCG AAAAGGCCCT GGCCGAGCAG TGCTACTTCG CCGTGTGCCG TCGTCTGCAC
AACTCGCTCA AGGCCCGCCA GCGCTCGCAC CGCCAGGTGC TGGACGAACT GAACGACAAG
CTGGCCGACA AGTACATCTG CAACTTCTCG GTGTTCCAGA GCCTGCCGGA CACCTGGGCC
ATCGGCCAGG TGCTGCCGAT CATCCCGTTG CACCGCCTGG ACGAAGAGCC GCTGCGCCGT
GCAGTGCTGC AGGACCTGAC CTGCGACTCC GACGGCAAGA TCAACCAGTA CGTCGACGAG
CAGAGCATCG AGACCAGCAT GCCGGTGCAC TCGCTCAAGG ACGGTGAGGA CTACCTGCTA
GGCGTGTTCC TGGTCGGTGC CTACCAGGAA ATCCTCGGTG ACATGCACAA CCTGTTCGGT
GATACCGACT CGGTGAACAT TTACCAGAAC GCCGATGGCA GCGTGTTCCA CGCCGGTATC
GAGACCCACG ACACCATCGA AGACATGTTG CGCTATGTGC ACCTGTCGCC GGAGGAGTTG
ATGACCCACT ACCGCGACAA GGTGGCCAGC GCCAAGATCA GCGCCCGCGA GCGTACCCAG
TTCCTCGATG CATTGCGCCT GGGGCTGACC CGGTCTTCCT ACCTGTCGTC GTGA
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| Protein sequence | MSVRRTRKDD GSQWTVADSR SVYGIRHWGA GYFAINEAGR VEVRPNGPQS APIDLFEQVD
ELRQSGLSLP LLVRFPDILQ DRVRQLTGAF DANIARLEYQ SQYTALYPIK VNQQEAVVEN
IIATQNVSIG LEAGSKPELL AVLALAPKGG TIVCNGYKDR EFIRLALMGQ KLGHNVFIVI
EKESEVALVI EEAAELKVKP QVGLRVRLSS LASSKWADTG GEKSKFGLSA AQLISVVQRF
RDAGLDQGIR LLHFHMGSQI ANLADYQHGF KEAIRYYGEL RALGLPVDHI DVGGGLGVDY
DGTHSRNASS INYDMDDYAG VVVGMLKEFC DAQGLPHPHI FSESGRSLTA HHAMLVIQVT
DVEKHNDDVP TIENKESLPE TVQWLADLLG PTDIEMVTET YWRATHYMGD VAAQYADGKI
SLAEKALAEQ CYFAVCRRLH NSLKARQRSH RQVLDELNDK LADKYICNFS VFQSLPDTWA
IGQVLPIIPL HRLDEEPLRR AVLQDLTCDS DGKINQYVDE QSIETSMPVH SLKDGEDYLL
GVFLVGAYQE ILGDMHNLFG DTDSVNIYQN ADGSVFHAGI ETHDTIEDML RYVHLSPEEL
MTHYRDKVAS AKISARERTQ FLDALRLGLT RSSYLSS
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