| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4591 |
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| Symbol | |
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| ID | 6113572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5066527 |
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| End bp | 5068185 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641624397 |
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| Product | polypeptide-transport-associated domain-containing protein |
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| Protein accession | YP_001751440 |
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| Protein GI | 170723752 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0179388 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTTG CGGTCGTGCC CCTGTTACTG CTGACCTGGG CCAGCCTGGC CCTTGCCGAG
CCGTTGCCGG CTTTTCTCGA TACCCATGAA TACGAGCGCC GCCTGCCCAC CGCCAACCTG
CCGGTAGATA CCTATCGCCC CGTTACCCCG GCGCTGCATG TCGTGTTACC CGTGGCACCC
GCTAGCTTGC CGTCAGATGC CCGATTCGTG CTGCACAAGG TGCGCTTCGA GGGCGGTACG
GTTTACCCGC TGAGTGAATT ACGTGAGCAC TATCAAGCAT TGATTGGGCA CCAGATATCT
TTGGGTGATC TGCAGCAATT CACTGAGCGG CTGACCCAGC GTTACCAGCA TGATGGCTAC
CCCTTGTCGT ATGCCTACCT GCCACCCCAG GACTTTGCCG ATGGCCGTGT GCATGTGGTG
CTGGTGGAAG GGTACATCCA AGACTATGAA CTGCTCGGTG ATATCGGCCC GCCCGCGCTC
TACCTCAAGC AGGTGACAGG ACGCCTGCTG GCCGAGCGGC CACTGACCCA GGAAACCCTC
GAGCGCTATG TCGGCGCGGT GCAGCGGCTA CCGGGTATCA ATGTGCAGGC TGAAGTGGCG
ATGGGGCCCG CCCCTGAAGA CGCGAGCCGT CTGAAAATAC GTGCGTGGCG CAGACCAGTT
GATGCTGGCG TGACTCTGAA TGATGGCAGT CGCGGGGACC TGCAGGCGCT GTTCAAAATC
TCCAGCAATG GCCAGACACG CTTTGCCGAG CAACTGACTG CGAGCTTTCT GCTGCCAGCC
GGTGACGAAC ATGTTGATTA CCAGCGCCTG GATTACCGCC AGCCTCTGGG CGCTCACGGC
AACCAATTGC TGCTAGGCGC TGCACGGTAC CGCAGTGAGC CGCGTACTCG TGTCCGGCTG
GATGGCGGTG AGCACATCAA TCAGCGCCTT GAGAGCGAGC GCTATTCGGT CGGTTTGGGC
CAGCCGCTGA TGATTGCACC GAACGAATGG GTGAACGTGG CCGGGCGTTT TTATTCAATC
GGCGAGCACA TTGAGTATCG GGCGGGCGGC TTACCCGAGT ACGACACCTA TGTTCGCGCG
CTGTCATTCG AAGGCGACTG GCGAAAGGCA GATCCCGCTC GCCTGCGCTT CGCCAGTGCC
GGGGTCTATC AGGGTATGGA CTATCTGGGG GCGCGTAGCG ATGCAAACTA CGACATGGAC
TTTTTGCGCT TTCGGATCGC CGGGTTACAG AGCGACCAAC TTTCTGAAAA CTGGCAGGGC
GTCGTGTCGG CGGCAGCGTA CTGGAGTGAC GACAGGCTGC CCGACAGTGA GCGAGCGGTG
TTTGGCGGGC GGCTTTTCGG CCGCGGCTAC CCGAGCGACC AGGCCGCGGG TGACAAGGGC
TGGGGTGTGG CTTACGAGCT CAGCTACAGC ATTATGCCTG GCAGTGCCTG GTTGCAACGG
GTGCAGCCCT ATGCGGTGCT CGACGCGGCG CACGCCTGGT ACAACGGCGG GCCTTTCGAG
GATGCGCATC TCAGTTCGGT AGCGTTGGGC GTGCGCCTGG CAGGCGGGCG ATATGGCAAT
GTCGCGCTGG AGGTAGCCAA GCCGCTGGCG GATGTGGCAC TGGACAGCCT GAACCGTGGG
CCTCGGCTGA TGCTGAGTAT CAGCTATCAG TTGGATTGA
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| Protein sequence | MRLAVVPLLL LTWASLALAE PLPAFLDTHE YERRLPTANL PVDTYRPVTP ALHVVLPVAP
ASLPSDARFV LHKVRFEGGT VYPLSELREH YQALIGHQIS LGDLQQFTER LTQRYQHDGY
PLSYAYLPPQ DFADGRVHVV LVEGYIQDYE LLGDIGPPAL YLKQVTGRLL AERPLTQETL
ERYVGAVQRL PGINVQAEVA MGPAPEDASR LKIRAWRRPV DAGVTLNDGS RGDLQALFKI
SSNGQTRFAE QLTASFLLPA GDEHVDYQRL DYRQPLGAHG NQLLLGAARY RSEPRTRVRL
DGGEHINQRL ESERYSVGLG QPLMIAPNEW VNVAGRFYSI GEHIEYRAGG LPEYDTYVRA
LSFEGDWRKA DPARLRFASA GVYQGMDYLG ARSDANYDMD FLRFRIAGLQ SDQLSENWQG
VVSAAAYWSD DRLPDSERAV FGGRLFGRGY PSDQAAGDKG WGVAYELSYS IMPGSAWLQR
VQPYAVLDAA HAWYNGGPFE DAHLSSVALG VRLAGGRYGN VALEVAKPLA DVALDSLNRG
PRLMLSISYQ LD
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