Gene PputW619_4559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4559 
SymbolileS 
ID6113535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp5026802 
End bp5029633 
Gene Length2832 bp 
Protein Length943 aa 
Translation table11 
GC content64% 
IMG OID641624360 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_001751408 
Protein GI170723720 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.349463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACT ACAAAGCCAC GCTAAACCTT CCGGACACCG CCTTCCCCAT GAAGGCCGGC 
CTGCCTCAGC GCGAACCGCA GATCCTGCAG CGCTGGGACA GCATTGGCCT GTACCAGAAG
CTGCGCGAAA TTGGCAAGGA TCGTCCGAAG TTCGTCCTGC ACGACGGCCC GCCCTATGCC
AACGGCAAGA TTCACATCGG TCATGCGCTG AACAAGATTC TCAAGGACAT GATCGTCCGC
TCCAAGACCC TGTCCGGCTT CGACGCGCCT TACGTACCGG GTTGGGACTG CCACGGCCTG
CCGATCGAGC ACAAGGTCGA AGTCACCCAT GGCAAGCACC TGACGGCCGA CCGCACCCGT
GAGCTGTGCC GCGAGTACGC TGCCGAGCAG ATCGAAGGGC AGAAGACCGA GTTCATCCGC
CTGGGTGTGC TGGGTGACTG GGACAACCCG TACAAGACCA TGAATTTCGC CAACGAGGCC
GGTGAAATCC GTGCCCTGGC CGAAATGGTC AAGCAGGGCT TCGTGTTCAA GGGCCTCAAA
CCTGTGAACT GGTGCTTCGA TTGCGGCTCC GCACTCGCAG AAGCCGAGGT CGAGTACGCC
GACAAGAAGT CGCAGACCAT CGATGTGGCC TTCCCGGTCG CCGACGCCGA CAAACTGGCT
GCCGCGTTCG GCCTGCCGGC GCTGGCCAAG CCCGCTGCCA TCGTGATCTG GACCACCACC
CCGTGGACCA TCCCCGCCAA CCAGGCGCTG AACATCCACC CGGAGTTCAA GTACGCTCTG
GTCGATACCG GCGAGCGTCT GCTGGTGCTG GCCGAAGAAC TGGTCGAGTC GTGCCTCAAG
CGCTACAACC TGGAAGGCTC GGTCATCGCC ACCGCCCAGG GCTCGGCCCT GGAGCTGGTC
AATTTCCGTC ACCCCTTCTA CGACCGCCTG TCGCCTGTCT ACCTGGCCGA CTACGTCGAG
CTGGGCGCAG GTACCGGTGT GGTCCACTCC GCGCCAGCCT ACGGTGAAGA CGACTTTGTC
ACCTGCAAGC GCTACGGCAT GGTCAACGAC GATATCCTCA CGCCGGTGCA GAGCAACGGT
GTGTACGTCG AGTCGCTGGA GTTCTTTGGC GGCCAGTTCA TCTGGAAGGC CAACCCGGCC
ATCGTCGAAA AGCTGAGCGA AGTCGGTGCG CTGATGCACA CCGAGACCAT CAGCCACAGC
TACATGCACT GCTGGCGCCA CAAGACCCCG CTGATCTACC GCGCTACCGC GCAGTGGTTC
GTCGGCATGG ACAAGCAGCC AAGCACTGGC GAGCCGCTGC GTGAGCGCGC GCTCAAAGCC
ATCGAAGACA CCCAGTTCGT CCCGGCCTGG GGCCAGGCGC GCCTGCACTC GATGATAGCC
AACCGCCCGG ACTGGTGCAT CTCGCGTCAG CGCAACTGGG GTGTGCCGAT CCCGTTCTTC
CTGCACAAGC AGACCGGCGA ACTGCACCCG CGCACCGTCG AGCTGATGGA AGCCGTGGCC
AAGCGCGTCG AACAGGAAGG CATCGAGGCC TGGTTCAAGC TGGACGCCGC CGAACTGCTC
GGTGATGAAG CCGGCCAGTA CGACAAGATC ACCGACACCC TGGACGTGTG GTTCGACTCC
GGCACCACCC ACTGGCACGT ACTGCGCGGC TCGCACGACA TCGGCCACGC CACCGGCCCG
CGTGCGGACC TGTACCTGGA AGGCTCCGAC CAGCACCGTG GCTGGTTCCA TTCCTCGTTG
CTGACCGGTT GCGCCATCGA CAACCACGCG CCGTACCGCG AACTTCTGAC CCACGGCTTC
ACCGTGGACG AAAGCGGCCG CAAGATGTCC AAATCGCTGG GCAACACCAT CGAGCCGGAA
AAGGTCAACA ACACCCTGGG TGCCGACATC CTGCGCCTGT GGGTATCGGC CACCGACTAT
TCGGGTGAGA TGGCCGTTTC CGAGCAGATC CTGCAGCGCA GCGCCGACGC TTACCGTCGT
ATCCGCAACA CCGCCCGCTT CCTGCTCTCC AACCTGTCCG GCTTCGACCC GGCCCGCGAT
CTGCTGGCCC CAGAGGACAT GCTGGCCCTG GACCGCTGGG CAGTGGACCG TACCCTGTTG
CTGCAACGCG AGCTGGAAGA GCACTACAGC GAGTACCGTT TCTGGAATGT CTACTCGAAG
ATCCACAACT TCTGCGTGCA GGAGCTGGGC GGCTTCTACC TCGACATCAT CAAGGACCGC
CAGTACACCA CCGGCGCCAA CAGTGTTGCA CGCCGCTCCT GCCAGACCGC GCTGTACCAC
ATCAGCGAAG CGCTGGTGCG TTGGATCGCG CCGATCCTGG CCTTCACCGC CGATGAAATC
TGGCAGTACC TGCCGGGCGA GCGCAACGAG TCGGTCATGC TCAACGGCTG GTACCAGGGC
CTGAGCGAGC TGCCGGAAGG CACCGAGCTG GATCGCGCTT ACTGGGACCG CGTGATGGCG
GTCAAGGCTG CAGTCAACAA GGAGCTGGAA AACCAGCGTA CCGCCAAGGT CATCGGCGGC
AACCTGCAGG CCGAAGTCAC CCTGTTCGCC GAAGAAGGCC TTAGCGCCGA CCTGAGCAAG
CTGGGCGATG AACTGCGCTT CGTACTCATC ACCTCCGCTG CCAGCGTGGT GCCGTTCGCC
CAGGCGCCGG CCGATGCCGT GGCCACCGAA GTCGAAGGCC TCAAGCTGAA AGTGGTCAAG
TCTGGCCACG CCAAGTGCGG CCGCTGCTGG CACTTCCGCG CCGACGTCGG TAGCCATCCG
GAGCACCCGG AAATCTGCAG CCGTTGCGTC GACAACCTGA GCGGTTCCGG TGAGGTGCGC
CACTATGCCT AA
 
Protein sequence
MTDYKATLNL PDTAFPMKAG LPQREPQILQ RWDSIGLYQK LREIGKDRPK FVLHDGPPYA 
NGKIHIGHAL NKILKDMIVR SKTLSGFDAP YVPGWDCHGL PIEHKVEVTH GKHLTADRTR
ELCREYAAEQ IEGQKTEFIR LGVLGDWDNP YKTMNFANEA GEIRALAEMV KQGFVFKGLK
PVNWCFDCGS ALAEAEVEYA DKKSQTIDVA FPVADADKLA AAFGLPALAK PAAIVIWTTT
PWTIPANQAL NIHPEFKYAL VDTGERLLVL AEELVESCLK RYNLEGSVIA TAQGSALELV
NFRHPFYDRL SPVYLADYVE LGAGTGVVHS APAYGEDDFV TCKRYGMVND DILTPVQSNG
VYVESLEFFG GQFIWKANPA IVEKLSEVGA LMHTETISHS YMHCWRHKTP LIYRATAQWF
VGMDKQPSTG EPLRERALKA IEDTQFVPAW GQARLHSMIA NRPDWCISRQ RNWGVPIPFF
LHKQTGELHP RTVELMEAVA KRVEQEGIEA WFKLDAAELL GDEAGQYDKI TDTLDVWFDS
GTTHWHVLRG SHDIGHATGP RADLYLEGSD QHRGWFHSSL LTGCAIDNHA PYRELLTHGF
TVDESGRKMS KSLGNTIEPE KVNNTLGADI LRLWVSATDY SGEMAVSEQI LQRSADAYRR
IRNTARFLLS NLSGFDPARD LLAPEDMLAL DRWAVDRTLL LQRELEEHYS EYRFWNVYSK
IHNFCVQELG GFYLDIIKDR QYTTGANSVA RRSCQTALYH ISEALVRWIA PILAFTADEI
WQYLPGERNE SVMLNGWYQG LSELPEGTEL DRAYWDRVMA VKAAVNKELE NQRTAKVIGG
NLQAEVTLFA EEGLSADLSK LGDELRFVLI TSAASVVPFA QAPADAVATE VEGLKLKVVK
SGHAKCGRCW HFRADVGSHP EHPEICSRCV DNLSGSGEVR HYA