| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4556 |
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| Symbol | ispH |
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| ID | 6113532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5024902 |
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| End bp | 5025849 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641624357 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001751405 |
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| Protein GI | 170723717 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.357861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATCA AACTCGCCAA CCCTCGCGGT TTCTGCGCAG GGGTCGACCG GGCGATCGAG
ATCGTCAACC GTGCGCTGGA AGTCTTCGGC CCGCCGATCT ATGTGCGCCA TGAAGTGGTG
CACAACAAGT TCGTGGTAGA AGACCTGCGC AGCCGTGGCG CCATCTTCGT CGAAGAACTG
GACCAGGTAC CGGACGACGT CATCGTCATT TTCAGCGCCC ATGGTGTTTC CCAGGCCGTG
CGCCAGGAAG CCGCCGGTCG CGGCCTGAAA GTGTTCGACG CCACCTGCCC GCTGGTGACC
AAGGTGCATA TCGAGGTCGC CAAGTACAGC CGTGACGGCC GTGAGTGCAT CCTGATCGGC
CACGAAGGGC ACCCGGAGGT CGAAGGCACG ATGGGGCAAT ACGACGCCAG CAACGGCGGT
GCCATCTACC TGGTCGAAGA CGAGGAGGAT GTTGCCCGGC TGCAGGTACG CGACCCGGAC
AACCTGGCGT TCGTCACCCA GACCACGCTG TCGATGGACG ACACCAGCCG TGTCATCGAT
GCCCTGCGTA CGCGCTTCCC GAACATCGGC GGCCCGCGCA AGGACGACAT CTGCTACGCC
ACCCAGAACC GCCAGGACGC CGTCAAGCAA CTGGCCGGTG AGTGTGATGT GGTACTGGTG
GTGGGCAGCC CCAACAGTTC CAACTCCAAC CGCTTGCGTG AGCTGGCCGA GCGCATGGGT
ACCCCGGCCT ACCTGATCGA TGGCGCCGAG GACATGCAAC GCGGCTGGTT CGACCAGGCT
GCGCGGATTG GTATCACTGC TGGCGCTTCG GCCCCCGAGG TACTGGTGCG TGGCGTGATC
GACCAGCTCA AGGCCTGGGG TGCCACGGGC GCCGAAGAGC TCGATGGGCG CCCGGAGAAC
ATCACGTTCT CCATGCCCAA AGAGCTTCGG GTTCGTTCAC TGATCTGA
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| Protein sequence | MQIKLANPRG FCAGVDRAIE IVNRALEVFG PPIYVRHEVV HNKFVVEDLR SRGAIFVEEL
DQVPDDVIVI FSAHGVSQAV RQEAAGRGLK VFDATCPLVT KVHIEVAKYS RDGRECILIG
HEGHPEVEGT MGQYDASNGG AIYLVEDEED VARLQVRDPD NLAFVTQTTL SMDDTSRVID
ALRTRFPNIG GPRKDDICYA TQNRQDAVKQ LAGECDVVLV VGSPNSSNSN RLRELAERMG
TPAYLIDGAE DMQRGWFDQA ARIGITAGAS APEVLVRGVI DQLKAWGATG AEELDGRPEN
ITFSMPKELR VRSLI
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