Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4529 |
Symbol | |
ID | 6113501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4998963 |
End bp | 5000000 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641624326 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001751378 |
Protein GI | 170723690 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.882504 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGCAC CTAATCAGGT CTTCCTCAAT CAGAAAATAT TTGCTCCATA CAAGATCGCC ACGCTCGTTG AAGCAGTGGC TGAGCAAGGG ATCACTGCGG AAGTCGTCCT CCAGGGAACG CAGCTCGATG TCTCCCAAAT CAGCGATCCA AATACGCTGA CCTCGATTCA TCAGTACATT GAGGCCTGCG AAAATGTCAT CCGAGCCTCG GCAGACTCCT CAACTGCTTT TCAGGTTGGA TCTCGTATGC ATCTCTCTGC ATACGGGATG TATGGGTATG CGTTGATGTG CAGTTCAACG CTGCGAGATT TTTTCGACTT CGGCGTGAAA TACCACGTGC TCGCCACACC CACACTGACG ATCAGTTGGC GCGAAGAAGC CGATGCCGCC ATTTGGGAGT TCACGGAGGT TTACAGTCAT CTCATGAGCC CAAAGGCGAG GCAGTTTCTG CTCCGCCAGC AGATGGCTCA ACACGTCACT CATCTGAACG ATGCGGCAGG GCCTGAGTGC CGGCCTATAA AGGCTCTGTT CGCATTTCCC ACTCCTTCGG ATTCGGCCAG GTATGAGCGG TTCCTAGGGT GTGAATGCGA GTTTGGCCAT CAAGTGACGG AGCTTCACTA CCCTCATAAG ATTTTGGCCC AAGCTCCTCA GCTTGCTAAT CGCCTAACCC GTACCGTGCT GCAGGAAACG TGTGACCGTC TGATAGGCAA AGCGAAGACC TCGTCAGGCT TCGCGGGTGA GGTTTACCAA CTGATGATGC TGACTCCGAA TCAGTTTCCG ACGATGGAAC AGGTCGCTCA GCAAATGCGA TTGACCACCA GGACTCTACG CAGAAAGCTG GACGCGGAAG GGACGGACTT CGGAGCTATT CTTGATGACG TGAGAAGCAG CCTTGCCTTG GAGTATCTGC AAACCACTAA GATGAGCACT GAGGACATCG CAGCCAAAAT CGGCTTCAGC GACAGTACAA ATTTTCGACG AGCGTTCAAG CGGTGGACAG GGAAGACACC TCGGCAGGTC AGGGAGGAAT CGAAGTAG
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Protein sequence | MPAPNQVFLN QKIFAPYKIA TLVEAVAEQG ITAEVVLQGT QLDVSQISDP NTLTSIHQYI EACENVIRAS ADSSTAFQVG SRMHLSAYGM YGYALMCSST LRDFFDFGVK YHVLATPTLT ISWREEADAA IWEFTEVYSH LMSPKARQFL LRQQMAQHVT HLNDAAGPEC RPIKALFAFP TPSDSARYER FLGCECEFGH QVTELHYPHK ILAQAPQLAN RLTRTVLQET CDRLIGKAKT SSGFAGEVYQ LMMLTPNQFP TMEQVAQQMR LTTRTLRRKL DAEGTDFGAI LDDVRSSLAL EYLQTTKMST EDIAAKIGFS DSTNFRRAFK RWTGKTPRQV REESK
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