| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4468 |
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| Symbol | |
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| ID | 6113439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4929880 |
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| End bp | 4931391 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641624264 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001751317 |
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| Protein GI | 170723629 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.151382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGGC GCTGCTGTGG GTTGAGCCTG CTGATGGTGC TGGCCGGTTG CACCCAGGTC
GGCCCGGACT ATGAGACGCC CCGGCACGCG TGGCTGGGCA GCTGGAGTAC GCCATTGCTC
GAGCAGGCCC AGCGCAGGGC TGCGCAGCCG GAGCTGCGCC AGTGGTGGGC AGTGTTTGCC
GACCCGGCCT TGGACGCACT GATCGCCGAG GCCGACGCCA ATAACACCAG CCTGCGCGTA
GCCGGCCTGC GCGTCGCCGA GGCCAGGGCG CAGTTGGCCA TCGTCCAGAC CGGGCGTTAT
CCACAGTTGC AGCAACTGCG CGGGCAGAGT CTGTACCTCA AACAGGACCA GTCCGGCACC
GCCAGCGCCC GCGATTCGGT GTTCTGGCAG TCCAGCGCGG GTTTCGATAT CGGGTGGGAA
ATCGATTTCT GGGGGCGTTT CAGCCGCGCC ATCGAAAGCG CCGATGCCGC TTATTTCGCG
TCCCAGGCCA ATTACGCCGA CGCCATGCTG CTGATGCGTG CGCAGGTGGC CGACACCTAC
TTTGCCCTGC GCACCGCCGA GGCGCGGCTG CAGATCGCAA CGGAAAACGC CAGGCGCCAG
GCGCGTAGCC TGGAAATTAC CGAGCGGCTG TTCCGCCACG GCGAGAACGA CGAGCTCGAC
TGGCAGCAGG CGCGTACCCA GTACCTGGCA ACTCAGGCCA CGATTCCCGA GTTCGAAAAC
CAGCTCAATG CCTTGCGCAA TGTGCTCTGC GCGTTGCTTG ACAGACCGCC CGGGCCACTG
CCGCAGCTGG CTGCGCGGTA CGGCCAGTTA CCGCTGCCGG ACCGGGCTGT GTTGCAGGAC
GTGCCCGCCA GCCTGCTGCA GCGGCGCCCC GACATTCGTG CCGCCGAGCA AGCCGTGGCG
GCGCAGTCGG CACTCGTCGG GGTGGCCACC GCGGATCTTT ATCCACAGCT GAGCCTGCTG
GGCAGCATCG GCTGGACTTT CGTATCGGCC AATCAACTGC CCAACACCTT CGACCTGGCT
GCCGGGCCAA GCCTGATATG GAGCCCCTTC GACTACGGCC GCCGCAAGAA TGCCGTGCGT
GTCGAGGATG CGCGCCTGCA GCAGTTGATT GAGCTGTACC AGCAAGGGGT GCGTGAAGCT
GCGCGTGAGG CCGATGACGC CGCCAGTGGT CTGGTGCGTT CGCTGCAGAG CGCCAGCATT
CGCCAGGACG CCTCGCAGGC CGCTCAGCGC TCGCTGAACC TGGCCAGCGC CCAATACCAG
GAAGGCTTCG CCGATTTCCA GCGCGTGCTC GATGCCCAGC AACTGCTGTT GCAGCAGCAG
GACGGCTACC TGGTCAGCCG GGGGAACGCA GTGAGCAGCC TGGTGACGCT GTATAAAGCG
CTGGGCGGTG GTTGGGACAA CCAGCGCAAG CCCGTTGACC CGGCCACCCG CCAGCAGATG
GAAAACCGTA CCGATTGGGG TGACCTGCTG GACGAGCCGG CCCCCGCCGA CCCTGAACAA
GGTGAGCCCT GA
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| Protein sequence | MPRRCCGLSL LMVLAGCTQV GPDYETPRHA WLGSWSTPLL EQAQRRAAQP ELRQWWAVFA
DPALDALIAE ADANNTSLRV AGLRVAEARA QLAIVQTGRY PQLQQLRGQS LYLKQDQSGT
ASARDSVFWQ SSAGFDIGWE IDFWGRFSRA IESADAAYFA SQANYADAML LMRAQVADTY
FALRTAEARL QIATENARRQ ARSLEITERL FRHGENDELD WQQARTQYLA TQATIPEFEN
QLNALRNVLC ALLDRPPGPL PQLAARYGQL PLPDRAVLQD VPASLLQRRP DIRAAEQAVA
AQSALVGVAT ADLYPQLSLL GSIGWTFVSA NQLPNTFDLA AGPSLIWSPF DYGRRKNAVR
VEDARLQQLI ELYQQGVREA AREADDAASG LVRSLQSASI RQDASQAAQR SLNLASAQYQ
EGFADFQRVL DAQQLLLQQQ DGYLVSRGNA VSSLVTLYKA LGGGWDNQRK PVDPATRQQM
ENRTDWGDLL DEPAPADPEQ GEP
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