| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4460 |
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| Symbol | ipk |
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| ID | 6113430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4921350 |
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| End bp | 4922210 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641624255 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_001751309 |
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| Protein GI | 170723621 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.133155 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAGGC TCACCCTGCC CGCCCCGGCC AAGCTCAACC TGTGGCTGCA CATCATCGGC
CGCCGCCCGG ATGGTTACCA TGAGCTGGAG ACCGTCTTCC AGTTCCTCGA TCACGGCGAC
GAGCTGACCT TCGCATTGCG TGAAGACGGC GCTATCCGCC TGCACACCGA AATCGAAGCG
GTGCCCCACG ACAGCAACCT GATCGTGCGC GCCGCACGTA GGTTGCAGGA ACAGTCCGGC
ACCGGCCTTG GCGCCGACAT CTGGCTGACC AAGGTGCTGC CCATGGGCGG CGGCATCGGT
GGCGGAAGCT CGGATGCAGC GACCACACTG CTGGCGCTGG CGCACTTGTG GCAACTGGAT
TGGGATGAGG ATCGCCTGGC TGCCCTGGGC CTGACACTGG GTGCCGACGT GCCGGTGTTC
GTGCGTGGCC ATGCAGCATT CGCCCAAGGA GTGGGTGAGC AACTGACGCC GGTCGACCCG
GCCGAACCCT GGTACGTCGT GCTGGTGCCG CAAGTGTCTG TCAGCACAGT AGAAATTTTT
TCACATCCAC AGTTGACACG TGATTCCCTC CCCCTTAAGA TGCGCCCCGT TCCCGAGGGA
AACAGTCGAA ATGACTGCCA ACCGGTGGTA GAGCAGAGTT ACCCGGAAGT TCGCAACGCG
TTGAATTCAC TGGGTAAATT CACTGAAGCT CGATTAACCG GCACTGGAAG TTGTGTGTTT
GGGGCCTTCC CAAGCAAAGC CGAAGCTGAT AAAGTTCTGG CCCTTCTTTC AGCGACCCAA
ACAGGGTTTG TGGCGAAAGG AAGCAATGTT TCGATGTTGC ATCGCAAGCT GCAAAGTCTG
GTCAAGAAGT CGAGTGCCTA G
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| Protein sequence | MHRLTLPAPA KLNLWLHIIG RRPDGYHELE TVFQFLDHGD ELTFALREDG AIRLHTEIEA
VPHDSNLIVR AARRLQEQSG TGLGADIWLT KVLPMGGGIG GGSSDAATTL LALAHLWQLD
WDEDRLAALG LTLGADVPVF VRGHAAFAQG VGEQLTPVDP AEPWYVVLVP QVSVSTVEIF
SHPQLTRDSL PLKMRPVPEG NSRNDCQPVV EQSYPEVRNA LNSLGKFTEA RLTGTGSCVF
GAFPSKAEAD KVLALLSATQ TGFVAKGSNV SMLHRKLQSL VKKSSA
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