| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4428 |
|---|
| Symbol | |
|---|
| ID | 6113398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 4894202 |
|---|
| End bp | 4894786 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641624223 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001751277 |
|---|
| Protein GI | 170723589 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2119] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAAT CTCTCCTCGT ACCTACCGCG ATCGTCGCCC TGGCCGAAAT CGGCGACAAG
ACGCAACTGC TCGCACTCAT TCTGGCTGCC CGCTTCCGCA AGCCCTGGCC GATCATCGCC
GGCATCATCG CCGCCACCTT GGCCAACCAT GCCGCCGCAG GTGCCGTAGG CGCCTGGGTC
AGCGGGTTCT TCAGCGAGTC GACGCTGCAC TGGATTCTCG CCGCGAGCTT TACCGCCACG
GCCCTGTGGA CCCTGGTGCC AGACAAGATG GATGATGATG AAAACCCTGC GCGGCGCTTC
GGCCCGTTCC TTACTACGCT GATCGCGTTC TTCCTGGCCG AGATCGGTGA CAAGACCCAG
GTTGCCACGG TGATGCTGGC AGCCCAGTAC CCGCACCTGA TCATGGTCAT CATCGGTACC
ACGTTAGGCA TGCTGATTGC GAACGTACCG GTAGTCCTGG CGGGCAATTT CGCCGCAGAA
AAACTGCCGC TTACGCTGAT TCGTCGCCTG GCCGCGACGG CCTTCATCGT GCTGGCGATC
GTCGCCGTCT ACTCGGCAAT GAAAACCAGT GGGTGGGTGG GGTAA
|
|---|
| Protein sequence | MLESLLVPTA IVALAEIGDK TQLLALILAA RFRKPWPIIA GIIAATLANH AAAGAVGAWV
SGFFSESTLH WILAASFTAT ALWTLVPDKM DDDENPARRF GPFLTTLIAF FLAEIGDKTQ
VATVMLAAQY PHLIMVIIGT TLGMLIANVP VVLAGNFAAE KLPLTLIRRL AATAFIVLAI
VAVYSAMKTS GWVG
|
|---|
| |