Gene PputW619_4426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4426 
Symbol 
ID6113396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4891938 
End bp4892903 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content68% 
IMG OID641624221 
Productglycerate dehydrogenase 
Protein accessionYP_001751275 
Protein GI170723587 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGCA CGCGTCGCGC CGTGTTTCTC GATCATCAAT CCCTGGACCT TGGTGACCTC 
GACCTTTCAC CTTTGCAGAG CCAGTTCGAC GCGTTCGAAC TGTACGACGC CACCCGCCCG
GATCAGGTAG CCGAGCGCCT GCAGGGCGCC GTTGCGGTGA TCAGCAACAA GGTCATGCTC
GACGCCGACG CCCTGTCTGC CAACCCACAG CTCAAGCTGA TCCTGGTCGC CGCCACCGGC
ACCAACAACG TCGACCTCGC TGCCGCCCGC GCCCAGGGCA TCACCGTCTG CAATTGCCAA
GGCTACGGCA CGCCCTCGGT GGCACAGCAC ACCTTGGCCC TGCTGCTGGC ACTGGCCACG
CGCCTGTGCG ACTACAACCA GGCGGTGGCC GAGGGCCAAT GGGCCAAGGC CAGCCAGTTC
TGCCTGCTGG ACTTCCCGAT CGTGGAACTG GAAGGCAAGA CCCTTGGCCT GCTCGGCCAT
GGCGAACTCG GTGGCGCCGT CGCGCGGCTT GCAGAAGCCT TTGGCATGCG CGTGCTGAGC
GGGCAGATCC CCGGGCGCCC TGCGCGCAAC GATCGCCTGC CGCTGGATGA ACTGCTGCCG
CAAGTCGATG CCCTGACCCT GCACTGCCCA CTCAACGAAC ACACACGGCA CATGATAGGC
GCACGTGAGC TGGCATTGCT CAAGCCCGGC GCGCTGGTGG TCAATACTGC ACGTGGCGGC
CTGATCGACG AGCAGGCCCT GGCCGACACC CTGCGTCGCG GCCATCTGGG CGGCGCCGCC
ACCGACGTGC TGAGCGTCGA GCCGCCGGTC AACGGCAACC CGCTGCTGGC CGGCGACATC
CCGCGCCTGC TGATCACGCC GCACAGCGCC TGGGGCGCGG TGGAGTCGCG CCAGCGCATC
GTCGGCCAGC TCAGCGAGAA CACCCAGGCA TTCTTTGCCG GCCAGCCACG CCGCGTGGTC
AGCTGA
 
Protein sequence
MPSTRRAVFL DHQSLDLGDL DLSPLQSQFD AFELYDATRP DQVAERLQGA VAVISNKVML 
DADALSANPQ LKLILVAATG TNNVDLAAAR AQGITVCNCQ GYGTPSVAQH TLALLLALAT
RLCDYNQAVA EGQWAKASQF CLLDFPIVEL EGKTLGLLGH GELGGAVARL AEAFGMRVLS
GQIPGRPARN DRLPLDELLP QVDALTLHCP LNEHTRHMIG ARELALLKPG ALVVNTARGG
LIDEQALADT LRRGHLGGAA TDVLSVEPPV NGNPLLAGDI PRLLITPHSA WGAVESRQRI
VGQLSENTQA FFAGQPRRVV S