Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4426 |
Symbol | |
ID | 6113396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 4891938 |
End bp | 4892903 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641624221 |
Product | glycerate dehydrogenase |
Protein accession | YP_001751275 |
Protein GI | 170723587 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGCA CGCGTCGCGC CGTGTTTCTC GATCATCAAT CCCTGGACCT TGGTGACCTC GACCTTTCAC CTTTGCAGAG CCAGTTCGAC GCGTTCGAAC TGTACGACGC CACCCGCCCG GATCAGGTAG CCGAGCGCCT GCAGGGCGCC GTTGCGGTGA TCAGCAACAA GGTCATGCTC GACGCCGACG CCCTGTCTGC CAACCCACAG CTCAAGCTGA TCCTGGTCGC CGCCACCGGC ACCAACAACG TCGACCTCGC TGCCGCCCGC GCCCAGGGCA TCACCGTCTG CAATTGCCAA GGCTACGGCA CGCCCTCGGT GGCACAGCAC ACCTTGGCCC TGCTGCTGGC ACTGGCCACG CGCCTGTGCG ACTACAACCA GGCGGTGGCC GAGGGCCAAT GGGCCAAGGC CAGCCAGTTC TGCCTGCTGG ACTTCCCGAT CGTGGAACTG GAAGGCAAGA CCCTTGGCCT GCTCGGCCAT GGCGAACTCG GTGGCGCCGT CGCGCGGCTT GCAGAAGCCT TTGGCATGCG CGTGCTGAGC GGGCAGATCC CCGGGCGCCC TGCGCGCAAC GATCGCCTGC CGCTGGATGA ACTGCTGCCG CAAGTCGATG CCCTGACCCT GCACTGCCCA CTCAACGAAC ACACACGGCA CATGATAGGC GCACGTGAGC TGGCATTGCT CAAGCCCGGC GCGCTGGTGG TCAATACTGC ACGTGGCGGC CTGATCGACG AGCAGGCCCT GGCCGACACC CTGCGTCGCG GCCATCTGGG CGGCGCCGCC ACCGACGTGC TGAGCGTCGA GCCGCCGGTC AACGGCAACC CGCTGCTGGC CGGCGACATC CCGCGCCTGC TGATCACGCC GCACAGCGCC TGGGGCGCGG TGGAGTCGCG CCAGCGCATC GTCGGCCAGC TCAGCGAGAA CACCCAGGCA TTCTTTGCCG GCCAGCCACG CCGCGTGGTC AGCTGA
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Protein sequence | MPSTRRAVFL DHQSLDLGDL DLSPLQSQFD AFELYDATRP DQVAERLQGA VAVISNKVML DADALSANPQ LKLILVAATG TNNVDLAAAR AQGITVCNCQ GYGTPSVAQH TLALLLALAT RLCDYNQAVA EGQWAKASQF CLLDFPIVEL EGKTLGLLGH GELGGAVARL AEAFGMRVLS GQIPGRPARN DRLPLDELLP QVDALTLHCP LNEHTRHMIG ARELALLKPG ALVVNTARGG LIDEQALADT LRRGHLGGAA TDVLSVEPPV NGNPLLAGDI PRLLITPHSA WGAVESRQRI VGQLSENTQA FFAGQPRRVV S
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