Gene PputW619_4354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4354 
Symbol 
ID6113324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4798294 
End bp4799631 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content57% 
IMG OID641624149 
Productintegrase family protein 
Protein accessionYP_001751203 
Protein GI170723515 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0248698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTTC CTAAGGCTAA AACCCTTACC GTCACTATTA GTGACGCCGA GATTCGCCGC 
CATGCTGGCG GCGAAGTTCG TCAACTGCGC GACTCCCGTC ATCGAGAAAT TCGCTTCCGC
TATTCCACAA CTGATCGCAC TCGCGGAGCG TGGCACGTCG TTGTAGATCA GGTATGGCGT
AAAGCCGGTA GTTACCCCGG TATCAACACA AAGACCCTGC TAGCCACACT CCCCGAAATT
TTGGCTCGGA GGGCGCTGGA TGTTTCGGCG ACATCGACCA CCACCAACTG GCGCACGGTC
GGTGAACTGC TGGTGTGGTG GTTGGACCGG ATGGCGCGTG ATCGTGGTTT GTCGGTGAAG
CGCAAGGCCA GCGCCAAATC TGCATTGAAT TGCCATCTAA TCCCGTGCCT GGGTGACCTT
CCGCTTAACA ACGTGACCAA GTCCGAATTG GACCGCCGCA TAATGTGGCC TATGCAGGAG
CGCTATGCGC TCTCGTTTGT GCGCTCAGTG TATGGAGTAC TCGCAGTGGC ATTTCGCCAA
GCGATGCGGC TGGACATGCT CCGTGTTAAT CCAATGGAAA GTCTCAAGTA CACCGATTTT
GTCCGAACTC GGATCAAGCC CAAGCCTGCT CGCCTGCGTG GCGACGATCT GCCAGCGTTG
CTGAGTGATC TGGCGGATGG CTTTGAGGGC GAGCCGGCAG GAGTGATGCT GGCATTAATG
ATGCTGTGCC ACGGCACCCG ATTGGGCGAA ACCCGGTTGG CGCGCTGGCG CAACATCAAC
CTCGAAAGTG GCCAATGGTT CATCCCGGCA TGCGACACCA AGACTAAGGC TGAGCACAAG
TTGCCGCTAT CGGCCCAGGC CTGCGCACTG CTGCATCGGT ATCGAGTTCG GCAGCAGACG
GATGGCTACA ATGGGCCGCT GCTGTTTCCA GGCAATGCAG GCTCGGCTAT TAGCGCGAGC
AAGGCCAGCA ACCTGTTCAC CGACTTAGCC AAAGCAGAAT GGTCCAGCCA TGATCTGCGT
AAGGTGGCTC GCACTGCGTG GACTGACCTA GGTGTGGATT ACATGGTGGG AGAAATGCTG
CTGAATCACG CGATGAAAGA TCTTGATGCC ACTTACATCC ACACCACTGC CGAGGGCTTG
AAAAGGCGTG CGTTGGAGGG TTGGCACGAG CATTTAGACG CACTGGGCTT CAATCTGATT
CATTCCCCAC CTTCCTGCAT CCTCCCTTGG GATGGACACA CGGAATCGCT GGAAGCCGCG
CCCTTGCTGG CCTTGGACGA TAACCCCACC TCTCTCTGTC TCGGCGATGT ACCGGGCGAT
ACCGGGCTTT GGCGCTGA
 
Protein sequence
MSLPKAKTLT VTISDAEIRR HAGGEVRQLR DSRHREIRFR YSTTDRTRGA WHVVVDQVWR 
KAGSYPGINT KTLLATLPEI LARRALDVSA TSTTTNWRTV GELLVWWLDR MARDRGLSVK
RKASAKSALN CHLIPCLGDL PLNNVTKSEL DRRIMWPMQE RYALSFVRSV YGVLAVAFRQ
AMRLDMLRVN PMESLKYTDF VRTRIKPKPA RLRGDDLPAL LSDLADGFEG EPAGVMLALM
MLCHGTRLGE TRLARWRNIN LESGQWFIPA CDTKTKAEHK LPLSAQACAL LHRYRVRQQT
DGYNGPLLFP GNAGSAISAS KASNLFTDLA KAEWSSHDLR KVARTAWTDL GVDYMVGEML
LNHAMKDLDA TYIHTTAEGL KRRALEGWHE HLDALGFNLI HSPPSCILPW DGHTESLEAA
PLLALDDNPT SLCLGDVPGD TGLWR