| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4353 |
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| Symbol | |
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| ID | 6113323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4796418 |
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| End bp | 4798280 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641624148 |
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| Product | peptidase S14 ClpP |
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| Protein accession | YP_001751202 |
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| Protein GI | 170723514 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.26326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00986992 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACCTGC AAATCTATGA CGTAATCGAT GCCGCCACCG CGCAGAGGGT CAAGGCTATC
GTAGTGGGCC AGATGCCGAT CACGGTACAA ATCAACAGCC CAGGCGGCAG CGTCACCGAT
GCCTTGGCGA TCTACACCGT CCTGCGAAAA CATACGGGAC GCGTCACCGC CATCGTCGAC
GGTCTATGCG CCAGTGCGGC AACTCTCGTG GCGCTTGCCG CCGATGAGAT CGTGATGGCT
GAGCACAGCT TGATGATGGT CCATAACCCC TGGACGGTCG CATCAGGAGA TGCGGACGAA
ATGCGCAAAA CCGCCGATAC GCTCGACGTT GCCAGCCGGG AAATGACCGC GCTTTACACC
GAACGCACGG GCCTGAGCGC AGAAAAAATC ACCGCCATCA TGGGCGCTGA AACCTGGTTC
AACAGCTATG AGGCTGTCGA TGCCGGCTTC GCCCACCGAG TCGACAATTC CGAGCGCAGC
AAACCGCGCA TGGCCGCCAC AGCCATGGCG TTCATCGAGC GCGTTATCCA AACCCCTGAA
GCCGCTACGC GCTGCCGACA ACGACTCGAC AACAGCCGCG AAGCACACCA CACACACCGG
CTGAAAATGC TCAATTTCCT CACAGCAGGT TTTGAGAGTC ACGAAGGTGT CCAGCGCATT
AAAGCGAGTA AAGAATTCAT GAGCTACAGC ACAAAGCAAG CAGGCGAAGC AATCCTGGCC
GCCCTGGGTG CGGACACAAC GCCATGCAAC GTTCAATCGG CCTACTCGAC CCCCGGTTAC
GTGAGTAACG GCAACATCGT GCGAGACGGC ATGGTCGATG CTCTGACCAC TCGCCTTGGC
CTTGCCCAAG CTCAAGATAA CCGCAACCCC TTCCGCACCA TGACCTTAGC CGAGATGGCC
CGCGCCTCGC TCATCGAGCG CGGTGTAGGC GTGTCCGGCT ACGGCTCGAA AATGCAGCTG
GTCGGCGCGG CCTTCACCCA CATGAGTAGC GATTTTGGCA ACGTGCTGAT GGACGTTTCT
GGAAAAGCCA TGCTGCGCGG CTGGGAGGCC AGTGGTGAGA CGTTCCAGCG CTGGACCAAG
AAAGGCTCGC TGAGCAATTT CCACCCTGCC CGCCGCGTGG GCATTTCTGG TTTCCCGACG
CTGCCAAAAG TTCCAGAGGG TGCAGAGTAC AAGTACGTCA CCTGCAACGA CCGGGGCGCC
CCCATCGCTC TGGCTACCTA TGGCGGCCTG TTCAGCATCA CGCGCCAAGC GATCATCAAC
GACGACCTGA GCGCCTTCAG CACTTTGCCA GCTCACCTAG GCCGCTCGGC TAGTCGCACC
ATCGGCGACT TGGTCTATTC AGTGCTGACC ACCAATGCGG CCTTCGTGGA CGGCAAACCA
CTGTTTGGTG CTGATCACGG CAACACCGAT GAATCGGCTG CCGCAATGTC TCCGGTAATC
CTGGGTGAAC TGCGCCGCAA GATGCGCTTG CAGAAGGATG ACTTCGATAC AGCTCTGAAT
ATTTCGCCCG CTTTCGTCAT CGTCCCGGCC GGCCTGGAGT CAGCTGCCAT GCAGGTACTC
AATAGCTCCT CGGTTCCAGG CGCAGACTAC AACAGCGGGA TAGCCAACCC CGTCAACAAA
ATGGGCGAAC TGATCGTTGA GAGTCGCCTG GATCGGGTGG CGACACCGTA CTGGTACGTG
GCGGCAGAAC AGGGCGCGGA TACCATCGAA GTGGCCTACC TGGATGGCGT TGATACGCCC
TACTTGGAGG AGCAGGAAGG CTGGACCGTA GATGGGGTTA GCCTCAAGGT ACGGATCGAT
GCCGGCGTGG CGCCGTTAGA CTATCGCGGC TTGGCGCGCG CCAAAGTCAA AACCGGGTCC
TGA
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| Protein sequence | MDLQIYDVID AATAQRVKAI VVGQMPITVQ INSPGGSVTD ALAIYTVLRK HTGRVTAIVD
GLCASAATLV ALAADEIVMA EHSLMMVHNP WTVASGDADE MRKTADTLDV ASREMTALYT
ERTGLSAEKI TAIMGAETWF NSYEAVDAGF AHRVDNSERS KPRMAATAMA FIERVIQTPE
AATRCRQRLD NSREAHHTHR LKMLNFLTAG FESHEGVQRI KASKEFMSYS TKQAGEAILA
ALGADTTPCN VQSAYSTPGY VSNGNIVRDG MVDALTTRLG LAQAQDNRNP FRTMTLAEMA
RASLIERGVG VSGYGSKMQL VGAAFTHMSS DFGNVLMDVS GKAMLRGWEA SGETFQRWTK
KGSLSNFHPA RRVGISGFPT LPKVPEGAEY KYVTCNDRGA PIALATYGGL FSITRQAIIN
DDLSAFSTLP AHLGRSASRT IGDLVYSVLT TNAAFVDGKP LFGADHGNTD ESAAAMSPVI
LGELRRKMRL QKDDFDTALN ISPAFVIVPA GLESAAMQVL NSSSVPGADY NSGIANPVNK
MGELIVESRL DRVATPYWYV AAEQGADTIE VAYLDGVDTP YLEEQEGWTV DGVSLKVRID
AGVAPLDYRG LARAKVKTGS
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