| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4345 |
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| Symbol | tgt |
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| ID | 6113314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4788343 |
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| End bp | 4789476 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641624139 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_001751194 |
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| Protein GI | 170723506 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00000330572 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTCGCA CCTGTCGAAT GTCCTTCGAA CTGCTGGCCA CCGACGGCAA GGCCCGTCGT
GGCCGCCTGA CCTTCCCCCG TGGCACCGTC GAAACCCCGG CGTTCATGCC GGTGGGTACC
TATGGCACGG TCAAGGGCAT GCTGCCGCGT GACATCGAGG CCATCGGCGC CGAGATCATC
CTCGGCAACA CCTTCCACCT GTGGCTGCGC CCAGGCACCG AGGTGATCAA GAAGCACAAC
GGCCTGCACG ATTTCATGCA GTGGAAAGGC CCGATCCTGA CTGATTCGGG TGGTTTCCAG
GTGTTCAGCC TGGGTGCCAT GCGCAAGATC AAGGAGGAGG GCGTGACCTT CGCCTCCCCA
GTGGATGGCT CCAAGGTGTT CATGGGCCCG GAAGAGTCCA TGCAGGTGCA GCGTGACCTG
GGTTCAGACA TCGTGATGAT CTTCGACGAG TGCACACCGT ACCCGGCAGA GCACGATGTG
GCGCGCACCT CCATGGAACT GTCGCTGCGT TGGGCGCAAC GTTCGAAGAA CGCCCACGGG
GACAACACTG CGGCGCTGTT CGGCATCGTC CAGGGCGGCA TGTACCAGGA CTTGCGCATG
CGCTCGCTGG AAGCGCTGGT CAATATCGAC TTCGACGGCC TGGCCATCGG CGGCCTGTCG
GTGGGCGAGC CCAAGCACGA AATGATCAAG GTGCTGGATT ACCTGCCGGC CCAGATGCCT
GCTGACAAAC CTCGTTACCT TATGGGGGTA GGCAAACCTG AAGATCTCGT TGAGGGTGTG
CGCCGCGGCG TCGACATGTT CGACTGCGTG ATGCCGACGC GTAACGCGCG CAACGGCCAT
CTGTTCGTCG ATACAGGGGT GATCAAGATC CGCAACGCGT TCCATCGCCA CGATGATTCG
CCGCTGGATC CGACCTGTGA TTGCTACACC TGCACAAACT TCTCCCGCGC TTATCTCCAT
CACCTGGACA AGTGCGGCGA AATGTTGAGC AGCATGCTGA ATACCATCCA CAACTTGCGC
CATTACCAGC GCTTGATGGC CGGTTTACGC GAGGCTATTC AACAGGGTAA ATTGGCCGCC
TTTGTCGACG CCTTCTATGC CAAACGCGGG CTGCCTGTGC CGCCTTTGGA CTGA
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| Protein sequence | MSRTCRMSFE LLATDGKARR GRLTFPRGTV ETPAFMPVGT YGTVKGMLPR DIEAIGAEII
LGNTFHLWLR PGTEVIKKHN GLHDFMQWKG PILTDSGGFQ VFSLGAMRKI KEEGVTFASP
VDGSKVFMGP EESMQVQRDL GSDIVMIFDE CTPYPAEHDV ARTSMELSLR WAQRSKNAHG
DNTAALFGIV QGGMYQDLRM RSLEALVNID FDGLAIGGLS VGEPKHEMIK VLDYLPAQMP
ADKPRYLMGV GKPEDLVEGV RRGVDMFDCV MPTRNARNGH LFVDTGVIKI RNAFHRHDDS
PLDPTCDCYT CTNFSRAYLH HLDKCGEMLS SMLNTIHNLR HYQRLMAGLR EAIQQGKLAA
FVDAFYAKRG LPVPPLD
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