| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4336 |
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| Symbol | |
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| ID | 6113305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4779944 |
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| End bp | 4781158 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641624130 |
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| Product | cysteine desulfurase |
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| Protein accession | YP_001751185 |
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| Protein GI | 170723497 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.180367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000000219205 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGTTGC CGATCTACCT CGATTACTCC GCGACCACGC CGGTCGATCC CCGTGTCGCC
CAGAAGATGG CCGACTGCCT GCTGGTCGAC GGTAACTTCG GTAACCCGGC TTCGCGCTCC
CACGTGTTTG GCTGGAAAGC AGAGGAAGCG GTCGAAAACG GCCGTCGCCA GGTTGCCGAG
CTGATCAACG CCGACCCGCG CGAGATCGTC TGGACCAGCG GTGCTACCGA GTCCGACAAC
CTCGCCATCA AAGGCGTGGC GCACTTCTAT CAGTCCAAAG GCAAGCACAT CATCACCTCC
AAGATCGAGC ACAAGGCGGT CCTGGATACC GCTCGCCAGC TCGAGCGCGA AGGCTTCGAA
GTCACTTACC TTGAGCCAGG CGAAGACGGC ATCGTCACCC CGGCGCAGGT CGAGGCGGTG
CTGCGTGACG ACACCATTCT GGTCTCGCTG ATGCACGTCA ACAACGAAGT CGGCTCGATC
AACGACATTG CCGCCATCGG TGAACTGACC CGTTCGCGCG GCGTGTTGTT CCACGTTGAC
GCCGCCCAGT CGGCCGGCAA GGTGGAAATC GACCTGCAGA AGCTGAAAGT CGACCTGATG
TCGTTCTCTG CGCACAAGGC CTACGGCCCG AAAGGTATTG GCGCGCTGTA TGTCAGCCGC
AAGCCTCGCG TGCGTCTGGA GGCGATCATC CACGGCGGTG GCCATGAGCG CGGCATGCGG
TCGGGCACCT TGCCGACCCA CCAGATCGTC GGCATGGGCG AAGCGTTCGC CATTGCCAAG
CAGGAAATGG CTGCTGAAAA CCAGCGCATC AAGGCCCTGA GCGACCGCTT CTTCAAGCAG
GTCTCGGACC TCGAAGAGCT TTATGTCAAC GGTAGCCAGA CTGCCCGCGT ACCGCACAAC
CTGAACCTGA GCTTCAACTA TGTCGAAGGC GAGTCGCTGC TGATGTCGCT CAAGGACATC
GCGGTATCGT CCGGTTCGGC CTGCACCTCC GCTTCGCTCG AGCCGTCGTA TGTACTGCGC
GCTCTGGGCC GTAACGACGA GCTGGCGCAC AGCTCGATCC GCTTCTCCTT CGGCCGCTTC
ACCACCGAAG AAGAAGTCGA CTACGCCGCG CAGAAAGTCT GCGAGGCTGT AAACAAACTG
CGTGAGCTGT CGCCGCTGTG GGACATGTAC AAAGACGGCG TTGACATCTC CAAGATCGAG
TGGGCCGCCC ACTAA
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| Protein sequence | MKLPIYLDYS ATTPVDPRVA QKMADCLLVD GNFGNPASRS HVFGWKAEEA VENGRRQVAE
LINADPREIV WTSGATESDN LAIKGVAHFY QSKGKHIITS KIEHKAVLDT ARQLEREGFE
VTYLEPGEDG IVTPAQVEAV LRDDTILVSL MHVNNEVGSI NDIAAIGELT RSRGVLFHVD
AAQSAGKVEI DLQKLKVDLM SFSAHKAYGP KGIGALYVSR KPRVRLEAII HGGGHERGMR
SGTLPTHQIV GMGEAFAIAK QEMAAENQRI KALSDRFFKQ VSDLEELYVN GSQTARVPHN
LNLSFNYVEG ESLLMSLKDI AVSSGSACTS ASLEPSYVLR ALGRNDELAH SSIRFSFGRF
TTEEEVDYAA QKVCEAVNKL RELSPLWDMY KDGVDISKIE WAAH
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