| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4311 |
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| Symbol | |
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| ID | 6113280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4752194 |
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| End bp | 4754623 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641624105 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001751160 |
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| Protein GI | 170723472 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4772] Outer membrane receptor for Fe3+-dicitrate |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0939329 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACAACA ATAAACCTTT GCCGCGCTTG CGCGTTATGG CGCTGGCCCT GGCGGTCAGT
GCCGTGGCCG TCAACAGCCA CGCCGAACAG GGCGACACCA CCATCCAGAT CCAGGCTCAA
CCTTTGGCTT CGGCGCTCAG CCAATTGGGC CAGCAAACCC ACCTGCAGCT GTTCTACAGC
CCTGAGCTTG TGGCCGGCAA GCAGGCCCCG GCGGTGTCCG GTAAGCTGGC GCCGGTGCAG
GCCCTGCAAC AGTTGTTGCA GGGCAGCGGG CTGACCTTCG AAATGTCCCA GGATACCGTG
GTGGTAAAGC CGCTGCCGAC CACCCTCGAC CTGGGCAGCG GTAGCCTGGA ACTGGCGCCC
ACCGATATCA ACGTGGTTGG TGACTGGCTG GGTGATGCCG ATCAGGCCGT TGTGCAGAAT
CACCCCGGTG CGCGCACCGT GGTGCGCCGT GAGGCCATGG TGGAAAAGGG CACGATGAAC
GTGCGCGACG CACTGCGTGG CATCCCGGGC GTGCAAGTGC AGGACTCCAA CGGCACAGGT
GGCAGCGACC TGTCGCTCAA CGTAGGTGTA CGCGGCCTGA CGTCGCGCCT GTCGCCTCGC
TCTACGGTGC TGATCGATGG CATCCCGGCC GCTTTCGCTC CTTACGGTCA GCCGCAGCTG
TCCATGGCGC CGATCTCCTC GGGCAACCTC GACAGCATCG ATGTGGTGCG TGGTGCCGGT
TCGGTGCGCT ATGGCCCGCA GAACGTCGGT GGGGTGATCA ACTTCGTCAC CCGGGCGATC
CCGCAGCAGG CTTCGGCGGA GCTTTCCACC ACCCTGGAGA CCTCGCAGTA CGGCGGTTGG
AAGCACACCG AGTCGGCCTT CGTCGGCGGC ACTGCCGACA ACGGCATGGG TGTGGCGCTG
CTGTACACCG GGGTGAACGG CAACGGCTAC CGGCAGAGCA ACAACGGCAA TGACATCGAC
GACGTCATCC TCAAGACCCA CTGGGCACCG ACCGACGTTG ACGAGTTCTG GCTCAACTTC
CATTACTACG ATGGCCGTGC CGACATGCCC GGTGGCCTGA CCCAGGCCCA GTACGACAGC
AATCCGTACC AGTCACTGCG TGATTACGAT TACTTCGCCG GGCGTCGCAA GGACGTGTCG
TTCAAATGGC AGCGCCAACT CGACGAGGCC ACCCAGTTCG AAGTGCTGAC GTACTACACC
GACAGCTTCC GCGGCAGCAC CATTGCCTCG CGTGACATGA AGACCCTGTC GTCCTACCCG
CGCAATTACC ACACCTTCGC CATCGAGCCG CGCGTTTCGC GGATCTTCTT CGCCGGCCCC
ACCACCCAGG AAGTCAGTGT CGGTTACCGC TACCTCAAAG AAGCCATGCG CGAACAGTCG
ACCCGCCTGG CGCTGATCGA CAACGTTCCG ACGCCTACCC CGACGTCCGA CGGCCATGTA
TTCCAGGACC GCAGCGGCGG CACTGAGGCC AGTGCCTACT ACATCGATGA CAAGATCGAC
GTCGGCAACT GGACCATCAC CCCGGGTGTG CGCTTCGAGC ACATCAATAC TGACTGGCGC
GACCGCCCGG TGCTGGGTGC CAACAACCGC CCGGTGGCTG AGAAGAAACG CAGCATCACC
AGCAATGAAC CGCTACCTGC GCTGAGCGTC ATGTATCACA TCTCCGATGC CTGGAAGGTG
TTTGCCAACT ACGAAACGTC GTTCGGCAGC CTGCAGTACT TCCAGCTGGG CCAAGGCGGT
ACCGGTAACA GCACGGCTAA CGGCCTGGAG CCGGAAAAGG CCAAGACCTA CGAGCTGGGT
ACGCGCTATG ACAATGGTGC TTTCGCCGGG GAGCTGACGG CCTTCTACAT CGACTTCGAC
GACGAGCTGC AATACATCAG CAACGACGTG GGCTGGACCA ACCTGGGTGC AACCAAGCAC
CAGGGTATCG AGGCGTCGGT ACGCTACGAC CTGGCCGGGT TGGACCGGCG TCTGGAAGGG
CTGTCGGTGA ATGGTGGCTA CACCTACACC CGCGCGACTT ATGAAGGGGA GATTCCCGGC
TTCAAGGGGC GCGATCTACC GTTCTACTCA CGCCAAGTGG CCACCGCCGG CCTGCGCTAC
GCGGTCAACC ACTGGACCTG GAACCTGGAC GCCTACGCCC AATCCAAGCA GCGCGCGCCG
GGTACGGGGA TCAATGCCGA CGGGAGCTTC AATGGCGACT ACATCACCGA GCCGAGCGCT
GACGGGCAGT ATGGCGACAT TCCGGGGTAT GTGACCTGGC ATGCGCGTGG TGGCTATGAG
TTCGGACCGA AGATGGCCAA TTTGAAGCTG GCGGCGGGGG TGAAGAACCT CTTCGACAAG
CAGTATTTCA CCCGCTCCAG CGACAACAAT GCCGGCATTT ATGTGGGTGA GCCGCGGACC
TTCTATGTGC AGGCCAGCGT GGGGTTCTGA
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| Protein sequence | MNNNKPLPRL RVMALALAVS AVAVNSHAEQ GDTTIQIQAQ PLASALSQLG QQTHLQLFYS
PELVAGKQAP AVSGKLAPVQ ALQQLLQGSG LTFEMSQDTV VVKPLPTTLD LGSGSLELAP
TDINVVGDWL GDADQAVVQN HPGARTVVRR EAMVEKGTMN VRDALRGIPG VQVQDSNGTG
GSDLSLNVGV RGLTSRLSPR STVLIDGIPA AFAPYGQPQL SMAPISSGNL DSIDVVRGAG
SVRYGPQNVG GVINFVTRAI PQQASAELST TLETSQYGGW KHTESAFVGG TADNGMGVAL
LYTGVNGNGY RQSNNGNDID DVILKTHWAP TDVDEFWLNF HYYDGRADMP GGLTQAQYDS
NPYQSLRDYD YFAGRRKDVS FKWQRQLDEA TQFEVLTYYT DSFRGSTIAS RDMKTLSSYP
RNYHTFAIEP RVSRIFFAGP TTQEVSVGYR YLKEAMREQS TRLALIDNVP TPTPTSDGHV
FQDRSGGTEA SAYYIDDKID VGNWTITPGV RFEHINTDWR DRPVLGANNR PVAEKKRSIT
SNEPLPALSV MYHISDAWKV FANYETSFGS LQYFQLGQGG TGNSTANGLE PEKAKTYELG
TRYDNGAFAG ELTAFYIDFD DELQYISNDV GWTNLGATKH QGIEASVRYD LAGLDRRLEG
LSVNGGYTYT RATYEGEIPG FKGRDLPFYS RQVATAGLRY AVNHWTWNLD AYAQSKQRAP
GTGINADGSF NGDYITEPSA DGQYGDIPGY VTWHARGGYE FGPKMANLKL AAGVKNLFDK
QYFTRSSDNN AGIYVGEPRT FYVQASVGF
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