Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4305 |
Symbol | |
ID | 6113274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 4745418 |
End bp | 4746497 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641624099 |
Product | extracellular solute-binding protein |
Protein accession | YP_001751154 |
Protein GI | 170723466 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.330747 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTACCC TCCTTCTCGC ACCCCTGATG CTGGCCGCCA GCGTGGCCAA TGCCGCCGAC TCGGTAAAGA TCTACAACTG GTCCAGCTAC GTGGCCCCCG ACACGTTGAA GAACTTCCAG CAGGCCACCG GCATCAACCC GACCTACGAC GTGTACGACA GCAACGAGAC CCTCGACGGT AAGCTGATGA CCGGCAACTC AGGCTACGAC GTGGTGTTCC CCTCCAACCA CTTCATGGCC CGACAGATTC AGGGCAAGGC CCTGAAGAAG CTGGACAAGT CGCAGCTACC CGGCTGGAAC AACCTCAACC CGGTGCTGCT CAAGGCGCTG GAGGTCAACG ACCCCGGCAA CCAGTACGGT TTCCCGTACC TGTGGGGCAG TACCGGCATC GGCTACAACA TCGACAAGGT AAAGGCAGTG CTCGGTGACA ACGCCCCGGT GGATTCATGG GACCTGATCT TCAAGCCCGA GTACATGAGC AAGCTCAAGA GCTGTGGGAT CGCCGTGCTC GACAACGGCC CTGAACTGTT ACCCATCGCC CTGCACTACC TGGGTTTGCC GCACCACAGC AAAGACCCGA AGGACTACGA GAAGGCCAAG GAACTGCTGA TGCAGGTGCG CCCGTACATC AGCTACTTCC ATTCATCCAA GTACACAGGT GACCTGGCCA ATGGCGATAT CTGCGTGGTG GTAGGGTTCT CGGGTGACGT GCTGCAGGCG AAAAACCGCG CCGATGAGGC GAAGAACGGG GTGAAGGTCG GCTATTCGAT CCCCAAGGAA GGCGCACCGA TGTGGTTCGA CATGGTTGCC ATGCCGGCCG ATGCACCGGA TGAGAAGGCG GGTTATGCCT ACATGAATTA CCTGTTGCAG CCGCAGGTGA TGGCCAATAT CAGTAACCAT GTGCAGTACG CCAACGGCAA CCTCAAGGCC GACGCCCTGG TGGACCCGGC ACTCAAGGGC AACACCATGA TTTATCCGAG CGAAGAGATG ATGGGCAAGC TGTATGCGCT GGAGGCGATG CCGGCCAAGA TCGACCGCAT TCGTACACGC ATCTGGACCA GTATCAAGGC GGGGAACTGA
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Protein sequence | MRTLLLAPLM LAASVANAAD SVKIYNWSSY VAPDTLKNFQ QATGINPTYD VYDSNETLDG KLMTGNSGYD VVFPSNHFMA RQIQGKALKK LDKSQLPGWN NLNPVLLKAL EVNDPGNQYG FPYLWGSTGI GYNIDKVKAV LGDNAPVDSW DLIFKPEYMS KLKSCGIAVL DNGPELLPIA LHYLGLPHHS KDPKDYEKAK ELLMQVRPYI SYFHSSKYTG DLANGDICVV VGFSGDVLQA KNRADEAKNG VKVGYSIPKE GAPMWFDMVA MPADAPDEKA GYAYMNYLLQ PQVMANISNH VQYANGNLKA DALVDPALKG NTMIYPSEEM MGKLYALEAM PAKIDRIRTR IWTSIKAGN
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